Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., Aerotaxis sensor receptor protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  270 bits (690), Expect = 9e-77
 Identities = 174/508 (34%), Positives = 258/508 (50%), Gaps = 55/508 (10%)

Query: 5   MRKNLPVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPD 64
           MR N PVT    E   +  ++STT   SHITY N  F+ +SGF  EE+  QPHN+VRHPD
Sbjct: 1   MRVNSPVTQREYEFPDNATLMSTTDTQSHITYANAAFVDVSGFTLEEIQRQPHNLVRHPD 60

Query: 65  MPPAAFAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEP 124
           MP  AFA MW+TLK G  W  LVKNR KNGDHYWV A A P+I+NG+ V Y SVRTK   
Sbjct: 61  MPKEAFADMWATLKGGEPWTALVKNRRKNGDHYWVRANATPVIRNGQTVGYMSVRTKASR 120

Query: 125 SHVQAAEKAYAQLRNGKNILPKIRLGFHWKLILLVWGSLFASIAIVSLIYPSALMSILFL 184
             +  AE+ YA +R G+    K+  G   +  L+   ++F ++ + S I    L   L L
Sbjct: 121 EEIAGAERLYADMREGRAGHVKLHKGLLLRTGLMGLTTVFKTMGVRSRI---RLPLALLL 177

Query: 185 TLLVGSITTLGI------------------------TYLLVPMKRLIQSYCKDSDNPLSQ 220
             LVG    LG+                        + L  P++ L +   + +     +
Sbjct: 178 AGLVGGARALGMEGLAWAEFAGLSAVGIVLAGWFLESQLAGPLEYLREQALRVATGDTQK 237

Query: 221 VLYTGRSDEFG-------QLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSN 273
           V +  R DE G       QL    R    + S  +  +  A  ++ +  NDL        
Sbjct: 238 VAHMDRVDEIGMTMRTISQLGLMFRWLIDDVSQQVLTVQTAVTEIAQGNNDL-------- 289

Query: 274 ILTSEQQAETEQVATAINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSIT 333
                    TEQ A+++ + AAS++++    +  A +S  AN       Q+   AS++ +
Sbjct: 290 ------SQRTEQAASSLQQTAASMEQMTATVRQNAETSSQAN-------QLSGTASEAAS 336

Query: 334 ELEHEVSQAKQVIHELEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAV 393
              H VSQ    + E+ E S  IS ++ VI  IA QTN+LALNAA+EAARAGE GRGFAV
Sbjct: 337 RGGHAVSQVVNTMSEITESSRKISDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAV 396

Query: 394 VADEVRGLAARTQQSTMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTG 453
           VA EVR LA R+ ++  +I+++I    G+ +    +++ + +     V+Q ++ +D ++ 
Sbjct: 397 VAGEVRSLAQRSAEAAKEIKQLIGASAGKVEAGTRLVDEAGKTMDEIVQQVRRVSDLISE 456

Query: 454 IGKRVSDITGMSVQMATAVDQQSAVSDE 481
           I     + +G   Q++ AV     V+ +
Sbjct: 457 ISAATIEQSGGIQQVSQAVGHLDQVTQQ 484