Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  258 bits (659), Expect = 4e-73
 Identities = 180/531 (33%), Positives = 270/531 (50%), Gaps = 73/531 (13%)

Query: 5   MRKNLPVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPD 64
           MR NLPVT +   +     ++STT   S ITY NP F+ +SGF  +EL+GQPHN+VRHPD
Sbjct: 1   MRNNLPVTHNEFVIPEGVTLVSTTDLQSRITYCNPAFVAVSGFERDELLGQPHNIVRHPD 60

Query: 65  MPPAAFAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEP 124
           MP  AF  MW+TL SG  W  LVKNR KNGDHYWV A A P+++NG+ V Y SVRT P  
Sbjct: 61  MPAEAFRDMWATLASGSPWSALVKNRRKNGDHYWVEANATPVLENGQTVGYMSVRTAPTR 120

Query: 125 SHVQAAEKAYAQLRNGKN---------------------ILPKIRLGFHWKLILLVWGSL 163
             V+ AE  YA++R  +                      +    RL    ++ L   G  
Sbjct: 121 DQVKQAEALYARMRGEQGEGRVALSLRQGRVVQSGTIGRLRDMARLTLGKRVALCSVGMA 180

Query: 164 FASIAIVSLIYP---SALMSILFLTLLVGSITTLGITY-LLVPMKRLIQSYCKDSDNPLS 219
            A +    L  P   +A +      L V S   L +   +L P++R +    + +   LS
Sbjct: 181 AAGLVTGELAAPYGAAAHVGAGAALLAVASAAALLLRQQMLTPLQRAVAFANQMAAGDLS 240

Query: 220 QVLYTGRSDEFGQLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQ 279
                  + EFG+L  AL        AV+               D+ H +E   + +S+ 
Sbjct: 241 ARFQGHANGEFGELTKALNQLNVNLQAVVA--------------DVRHEVEGVQVASSQI 286

Query: 280 QA-------ETEQVATAINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSI 332
            A        TE  A+++ + AAS++E+++  + +AN+S  A+        ++SQ S S+
Sbjct: 287 AAGNQDLSSRTESQASSLEQTAASVEELSSTVQQSANASREAS--------VLSQRSASV 338

Query: 333 TELEHEVSQAKQVIHELEE---HSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGR 389
               ++     +VIH +++    SN I +++ VI  IA QTN+LALNAA+EAARAGE GR
Sbjct: 339 AREGNDAMA--RVIHTMDDISRSSNRIGEIIGVIDGIAFQTNILALNAAVEAARAGEQGR 396

Query: 390 GFAVVADEVRGLAARTQQSTMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAAD 449
           GFAVVA EVR LA RT  ++ +I+ +ID   G+   A + + HS+ + +  V Q+ +  +
Sbjct: 397 GFAVVAGEVRSLAQRTMTASKEIKALIDESTGQV-AAGSELVHSTGKTMTEVVQSVEQVN 455

Query: 450 ALTGIGKRVSDITGMSVQMA-------TAVDQQSAVSDEINHSISNIRMAA 493
            L      ++DIT  + + A        AV Q  +V+ + +  +  +  AA
Sbjct: 456 GL------IADITHATQEQALGLGQINQAVGQLDSVTQQNSAMVEQLAAAA 500