Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., Aerotaxis sensor receptor protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  259 bits (663), Expect = 1e-73
 Identities = 169/508 (33%), Positives = 252/508 (49%), Gaps = 55/508 (10%)

Query: 5   MRKNLPVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPD 64
           +R N P+T    E   +  ++STT   SHITY N  F+ +SGF+ EE+  QPHN+VRHPD
Sbjct: 1   LRTNSPITQREHEFPDNATLMSTTDTQSHITYANAAFVNVSGFSLEEIQQQPHNLVRHPD 60

Query: 65  MPPAAFAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEP 124
           MP  AF  MW+TLK G  W  LVKNR KNGDHYWV A A P+I++GK + Y SVRTK   
Sbjct: 61  MPREAFGDMWATLKGGEPWTALVKNRRKNGDHYWVRANATPVIRDGKTMGYMSVRTKATR 120

Query: 125 SHVQAAEKAYAQLRNGKNILPKIRLGFHWKLILLVWGSLFASIAIVSLIYPSALMSILFL 184
             +  AE+ YA +R G+    K+  G   ++ L+   ++F ++ + S I    L   + L
Sbjct: 121 EEIAGAERLYADMREGRAKHLKLHKGLLLRIGLMGITTVFKTMRVRSRI---RLSLAVLL 177

Query: 185 TLLVGSITTLGI------------------------TYLLVPMKRLIQSYCKDSDNPLSQ 220
             LVG    LG+                        + L  P++ L +   + +      
Sbjct: 178 AGLVGGAWALGLQGLHWAPFAGLCAVGVGLAGWFLESQLAGPLEALREQALRVATGDTRN 237

Query: 221 VLYTGRSDEFG-------QLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSN 273
           V    R DE G       QL    R    + S  +  +  A +++ +  NDL        
Sbjct: 238 VARMDRVDEIGMAMRSISQLGLMFRWLIDDVSQQVLTVQSAVSEIAQGNNDL-------- 289

Query: 274 ILTSEQQAETEQVATAINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSIT 333
                    TEQ A ++ + AAS++++    +  A +S  AN       Q+   AS +  
Sbjct: 290 ------SQRTEQAAASLQQTAASMEQMTASVRQNAETSRQAN-------QLAGTASDAAA 336

Query: 334 ELEHEVSQAKQVIHELEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAV 393
                VSQ  Q + E+ E S  I  ++ VI  IA QTN+LALNAA+EAARAGE GRGFAV
Sbjct: 337 RGGQAVSQVVQTMGEITERSRKIHDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAV 396

Query: 394 VADEVRGLAARTQQSTMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTG 453
           VA EVRGLA R+ ++  +I+ +I     + +    +++ + +     V Q Q+ +D ++ 
Sbjct: 397 VAGEVRGLARRSAEAAKEIKALIGASVDKVEAGTRLVDDAGKTMDEIVHQVQRVSDLISE 456

Query: 454 IGKRVSDITGMSVQMATAVDQQSAVSDE 481
           I     + +G   Q++ AV     V+ +
Sbjct: 457 ISSATIEQSGGIQQVSQAVGHLDEVTQQ 484