Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Aerotaxis sensor receptor protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  238 bits (607), Expect = 4e-67
 Identities = 157/513 (30%), Positives = 253/513 (49%), Gaps = 57/513 (11%)

Query: 15  NIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPDMPPAAFAHMW 74
           N  L   T ++STT  +S+IT+ N  F+++SG+   EL+ QPHN+VRHPDMP AAFA MW
Sbjct: 11  NTPLDDDTTLMSTTDLESYITHANDTFVQVSGYQLNELLAQPHNLVRHPDMPKAAFADMW 70

Query: 75  STLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEPSHVQAAEKAY 134
            TLK G  W G+VKNR KNGDHYWV A A+P+I+ G+V  Y S+RT+     V A E  Y
Sbjct: 71  YTLKQGEPWSGIVKNRRKNGDHYWVRANAVPMIREGRVTGYMSIRTRATDDEVAAVEPLY 130

Query: 135 AQLRNGK-------------NILPKI-RLGFHWKLILLVWGSLFASIAIVSLIYPSALMS 180
             L  G+              +L K+  +   W+ +  + G +   +A+      ++  +
Sbjct: 131 QALNEGRCSKRIHKGLVVRQGLLGKLPAMPVRWR-VRSIMGLMAVMLALALFGTDASWQA 189

Query: 181 ILFLTLLVGSITTLGITYLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEF-------GQL 233
           +L   L + + T L    ++ P++ +     K +    + V +  RSDE        GQL
Sbjct: 190 LLLGALAMLAGTALLEWQIVRPIENVATQALKVATGERNSVQHLNRSDELGLTLRAVGQL 249

Query: 234 EFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEM 293
               R    + S+ +  + + S +L K  NDL       N  T +     ++  T +N+M
Sbjct: 250 GLMCRWLINDVSSQVSSVRNGSERLAKGNNDL-------NEHTRQTVENVQETVTTMNQM 302

Query: 294 AASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHS 353
           A S++  +  A  A   S +A+     G + +    +++ ++ H   +            
Sbjct: 303 AESVKLNSETASAADKLSMAASSAATQGGEAMDTVIKTMDDIAHSTQR------------ 350

Query: 354 NDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQ 413
             I  +  +I  IA QTN+LALNAA+EAARAGE G+GFAVVA EVR LA+R+  +  DI+
Sbjct: 351 --IGTITTLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIR 408

Query: 414 RMIDT-------------LQGRAKLAVAVMEHSSQQALLSVEQA-QQAADALTGIGKRVS 459
           ++ID                GR    +     +    +  + Q+ Q+  D L+ + + V 
Sbjct: 409 KLIDASATKVQSGSEQVHAAGRTMDDIVAQVQNVTLLIARISQSTQEQTDGLSSLTRAVD 468

Query: 460 DITGMSVQMATAVDQQSAVSDEINHSISNIRMA 492
           ++  ++ + A  V++ + VS  + H  S +  A
Sbjct: 469 ELNRITQKNAALVEESAQVSAMVKHRASRLEDA 501