Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component (NCBI) from Escherichia coli BW25113

 Score =  239 bits (610), Expect = 2e-67
 Identities = 158/516 (30%), Positives = 260/516 (50%), Gaps = 55/516 (10%)

Query: 11  VTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPDMPPAAF 70
           VT  N  L+  T ++STT   S+IT+ N  F+++SG+  +EL GQPHNMVRHPDMP AAF
Sbjct: 7   VTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGYTLQELQGQPHNMVRHPDMPKAAF 66

Query: 71  AHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEPSHVQAA 130
           A MW TLK G  W G+VKNR KNGDHYWV A A+P+++ GK+  Y S+RT+     + A 
Sbjct: 67  ADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATDEEIAAV 126

Query: 131 EKAYAQLRNGKNILP-----KIRLGFHWKL--ILLVWGS------LFASIAIVSLIYPSA 177
           E  Y  L  G+          +R G+  KL  + L W +      +F  +A +     + 
Sbjct: 127 EPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAMLWFVAAP 186

Query: 178 LMSILFLTLLVGSITTLGITYLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEF------- 230
           +++ +   L+V   +      ++ P++ +     K +    + V +  RSDE        
Sbjct: 187 VVTYILCALVVLLASACFEWQIVRPIENVAHQALKVATGERNSVEHLNRSDELGLTLRAV 246

Query: 231 GQLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAI 290
           GQL    R    + S+ +  + + S  L K  ++L       N  T +     +Q    +
Sbjct: 247 GQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDEL-------NEHTQQTVDNVQQTVATM 299

Query: 291 NEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELE 350
           N+MAAS+++ +  A  A   S +A++  + G + ++   ++              + ++ 
Sbjct: 300 NQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKT--------------MDDIA 345

Query: 351 EHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTM 410
           + +  I  +  +I  IA QTN+LALNAA+EAARAGE G+GFAVVA EVR LA+R+  +  
Sbjct: 346 DSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAAN 405

Query: 411 DIQRMIDTLQGRAKLA--------------VAVMEHSSQQALLSVEQAQQAADALTGIGK 456
           DI+++ID    + +                VA +++ +Q          + AD L+ + +
Sbjct: 406 DIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLSSLTR 465

Query: 457 RVSDITGMSVQMATAVDQQSAVSDEINHSISNIRMA 492
            V ++  ++ + A  V++ + VS  + H  S +  A
Sbjct: 466 AVDELNLITQKNAELVEESAQVSAMVKHRASRLEDA 501