Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor from Enterobacter asburiae PDN3

 Score =  249 bits (637), Expect = 1e-70
 Identities = 170/509 (33%), Positives = 261/509 (51%), Gaps = 57/509 (11%)

Query: 11  VTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPDMPPAAF 70
           VT +   L   T ++STT   S+IT+ N  F+++SG+  +EL GQPHNMVRHPDMP AAF
Sbjct: 7   VTQNEYPLDDDTTLMSTTDVHSYITHANDTFVQVSGYQLDELTGQPHNMVRHPDMPKAAF 66

Query: 71  AHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEPSHVQAA 130
           A MW TL+ G  W G+VKNR KNGDHYWV A A+P+++ G+V  Y S+RTK     + A 
Sbjct: 67  ADMWYTLQQGEPWSGIVKNRRKNGDHYWVRANAVPMVRRGQVTGYMSIRTKATAEEIAAV 126

Query: 131 EKAYAQLRNG---KNILPKIRLGFHW--KL--------ILLVWGSLFASIAIVSLIYPSA 177
           E  Y  L +G   K +   + +G  W  KL        +  V  +LFA +A  +L+  SA
Sbjct: 127 EPLYRALNDGSCKKRVHKGLVVGKGWLGKLPAMPLRWRVRCVMAALFAVLA-ATLVATSA 185

Query: 178 LMSILFLTLLVGSITTLGITYLLV-PMKRLIQSYCKDSDNPLSQVLYTGRSDEF------ 230
               L    LV  + TL     +V P++ + +   K +    + V +  RSDE       
Sbjct: 186 GWIPLAAAALVMLLGTLLFEQQIVRPVENVARQALKVATGERNSVQHLKRSDELGLTLRA 245

Query: 231 -GQLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATA 289
            GQL    R    + S+ +  + D S++L +   DL       N  T +  A  +Q    
Sbjct: 246 VGQLGLMCRWLINDVSSQVVSVRDGSDRLAQGNEDL-------NDRTRQTVANVQQTVAT 298

Query: 290 INEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHEL 349
           +N+MAAS+Q         +NS  +A  + +S       AS + T+  + +    + + ++
Sbjct: 299 MNQMAASVQ---------SNSETAAEVDKLS-----VAASSAATKGGNAMQTVVKTMDDI 344

Query: 350 EEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQST 409
            + +  I  +  +I  IA QTN+LALNAA+EAARAGE G+GFAVVA EVR LA+R+  + 
Sbjct: 345 ADSTQRIGSITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSASAA 404

Query: 410 MDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMA 469
            DI+++ID               S+ +     EQ   A   +  I ++V ++T +  Q++
Sbjct: 405 NDIRKLIDA--------------SASKVQSGSEQVHAAGRTMDDIVEQVKNVTQLIAQIS 450

Query: 470 TAVDQQSAVSDEINHSISNIRMAADTNVD 498
            A  +Q+    E+  +++ +      N D
Sbjct: 451 HATSEQATGLSELTRAVAELDSITQKNAD 479