Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., aerotaxis sensor receptor Aer from Escherichia coli ECRC62

 Score =  243 bits (620), Expect = 1e-68
 Identities = 161/520 (30%), Positives = 263/520 (50%), Gaps = 63/520 (12%)

Query: 11  VTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPDMPPAAF 70
           VT  N  L+  T ++STT   S+IT+ N  F+++SGF  +EL GQPHNMVRHPDMP AAF
Sbjct: 7   VTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFTLQELQGQPHNMVRHPDMPKAAF 66

Query: 71  AHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEPSHVQAA 130
           A MW TLK G  W G+VKNR KNGDHYWV A A+P+++ GK+  Y S+RT+     + A 
Sbjct: 67  ADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATDEEIAAV 126

Query: 131 EKAYAQLRNGKNI----------------LPKIRLGFHWKLILLVWGSLFASIAIVSLIY 174
           E  Y  L  G+                  LP + L +  + ++ +   L A++    L +
Sbjct: 127 EPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAM----LWF 182

Query: 175 PSALMSILFLTLLVGSITTLGITYLLV-PMKRLIQSYCKDSDNPLSQVLYTGRSDEF--- 230
            +A +   FL +LV  + +    + +V P++ + +   K +    + V +  RSDE    
Sbjct: 183 VAAPVVTYFLCVLVVLLASACFEWQIVRPIENVARQALKVATGERNSVEHLNRSDELGLT 242

Query: 231 ----GQLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQV 286
               GQL    R    + S+ +  + + S  L K  ++L       N  T +     +Q 
Sbjct: 243 LRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDEL-------NEHTQQTVDNVQQT 295

Query: 287 ATAINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVI 346
              +N+MAAS+++ +  A  A   S +A++  + G + ++   ++              +
Sbjct: 296 VATMNQMAASVKQNSATASAADKLSITASNAAVQGGEAMTTVIKT--------------M 341

Query: 347 HELEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQ 406
            ++ + +  I  +  +I  IA QTN+LALNAA+EAARAGE G+GFAVVA EVR LA+R+ 
Sbjct: 342 DDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSA 401

Query: 407 QSTMDIQRMIDTLQGRAKLA--------------VAVMEHSSQQALLSVEQAQQAADALT 452
            +  DI+++ID    + +                VA +++ +Q          + AD L+
Sbjct: 402 NAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHSTLEQADGLS 461

Query: 453 GIGKRVSDITGMSVQMATAVDQQSAVSDEINHSISNIRMA 492
            + + V ++  ++ + A  V++ + VS  + H  S +  A
Sbjct: 462 SLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLEDA 501