Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., PAS domain-containing protein from Dickeya dianthicola ME23

 Score =  236 bits (602), Expect = 2e-66
 Identities = 158/502 (31%), Positives = 245/502 (48%), Gaps = 45/502 (8%)

Query: 5   MRKNLPVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPD 64
           MR N P+T     L  +T ++STT   SHITY N  F+++SGF E EL+G PHN+VRHPD
Sbjct: 1   MRVNAPITQQEYLLDDNTTLMSTTDVKSHITYANSAFIRVSGFDEHELMGTPHNIVRHPD 60

Query: 65  MPPAAFAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEP 124
           MP  AFA MW TL+ G SW GLVKNR KNGDHYWV A   P+  + ++  Y SVR  P+ 
Sbjct: 61  MPIEAFADMWYTLQQGDSWTGLVKNRRKNGDHYWVRANVTPVYHHNQLAGYISVRNTPKA 120

Query: 125 SHVQAAEKAYAQLRNGKNILPKIRLGFHWKLILLVWGSLFASIAIVS----LIYPSALMS 180
             +QAAE  Y  + + +    +   G   +  L    SLF  +++ S     +    L+ 
Sbjct: 121 EEIQAAEPLYEAVLSKQARHIRFYKGLVVRTGLFSVLSLFQRLSVRSRLRLAVLLGGLVP 180

Query: 181 ILFLTLLVGSITTLGITYLLV-------------PMKRLIQSYCKDSDNPLSQVLYTGRS 227
           +  + L  G+ T++  T LL+             P++ +++   +      +  ++  R 
Sbjct: 181 LALILLGCGATTSIVATLLLMVTLDRFLQRQIAHPLRLILRQAQQVVSGRRADSIHINRV 240

Query: 228 DEFGQLEFALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVA 287
           D+ G L   +        +++  +G     +N  +  L  +    +  T E  A  +Q A
Sbjct: 241 DDIGLLLRVVNQFGLNLHSLVDDVGTQVAGINSVSRQLADSNGDLSARTEETSANLQQTA 300

Query: 288 TAINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIH 347
            AI ++  ++Q+ A  A  A   +++A+     G  I              +++A  ++ 
Sbjct: 301 AAIEQITVAVQQSADTATQATQMAQNASLSASKGGDI--------------MAEAVGMME 346

Query: 348 ELEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQ 407
            +   S  I  ++ VI SIA QTN+LALNAA+EAARAG  GRGFAVVA EVR LA  +  
Sbjct: 347 AISNASRKIVDIIGVIDSIAFQTNILALNAAVEAARAGVEGRGFAVVAAEVRSLAQHSAS 406

Query: 408 STMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQ 467
           +  +I+ +ID      +   A+++ +       V   QQ A               M  +
Sbjct: 407 AAREIKTLIDANMTSVENGSALVDKAGLHIQDIVNDVQQVA--------------AMISE 452

Query: 468 MATAVDQQSAVSDEINHSISNI 489
           ++ A  +Q+A    IN SI+ I
Sbjct: 453 ISNATHEQTAALSLINDSIAQI 474