Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., PAS domain-containing protein from Dickeya dianthicola ME23

 Score =  263 bits (671), Expect = 2e-74
 Identities = 173/532 (32%), Positives = 275/532 (51%), Gaps = 57/532 (10%)

Query: 5   MRKNLPVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPD 64
           MRKN PV+     L + T ++S TTPDSHITY N DF+ +SG+  EEL+ QPHN++RHPD
Sbjct: 1   MRKNYPVSQRQYPLDAKTKLMSVTTPDSHITYANADFINVSGYEPEELMNQPHNIIRHPD 60

Query: 65  MPPAAFAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEP 124
           MPP+AFA MW+TLK+G+ W G+VKNRCKNGDHYWV +   P+ ++GK++ Y SVRT    
Sbjct: 61  MPPSAFADMWNTLKAGKIWTGVVKNRCKNGDHYWVRSSTTPLKRDGKLMGYMSVRTAATA 120

Query: 125 SHVQAAEKAYAQLRNGKNILPKIRLG---FHWKLIL----LVWGSLFASIAIVSLIYP-S 176
             +  AE  YAQ+  G        LG   FH  L++    L W SLF ++ +   I    
Sbjct: 121 EEISQAEALYAQVNQG-------TLGNRAFHHGLLVYTGPLKWLSLFKAMPLRWRIRSYF 173

Query: 177 ALMSILFLTLLVGSITTLGITYLLVP-MKRLIQSYC----KDSDNPLSQVLYTGRSDEFG 231
            L+  L L +    +    + + L P +  L   +C    +    P+ Q+L        G
Sbjct: 174 GLLGGLPLAVAFALLPKTALIWGLFPALMALACLFCELLVQQVARPVEQILEQAMRSAAG 233

Query: 232 QLEFALRMAQAETSAVIGR-IGDASNQLNKFANDLLHNIEKSNILTSEQQ------AE-T 283
           Q      + +A+   ++ R +  +      F +D+  N+++  I  SE        AE  
Sbjct: 234 QANSLTPLNRADEIGMLMRAVNQSGMNFRTFVDDVNSNLQELKIACSEIAQGNHILAECC 293

Query: 284 EQVATAINEMAASIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAK 343
           E+   ++ + AAS++++    K  A++S+ A+       Q+V+   Q+++    EV+   
Sbjct: 294 EKTEESLQQTAASVEQLTATIKSNADASQRASQYAQDVNQVVNVGEQAVS----EVANTM 349

Query: 344 QVIHELEEHSNDISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAA 403
           Q I    E    I+ ++ V+ ++A QTN+LA+NAA+EAA AGE G+ FAVVA EVR LA 
Sbjct: 350 QAITRASER---ITNIIGVLDNLAFQTNILAINAAVEAAHAGEQGKSFAVVASEVRSLAQ 406

Query: 404 RTQQSTMDIQRMIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITG 463
           R+  S  DI  +ID      +     + H+++              ++  I  +V D+T 
Sbjct: 407 RSAASAKDIAALIDNTLSSIRAGDQQVVHTNR--------------SMNNILVKVQDVTH 452

Query: 464 MSVQMATAVDQQSAVSDEINHSIS--------NIRMAADTNVDNGKINAKCA 507
           +   ++ A  +QS    +IN +++        N  +A+ +N   G +  + A
Sbjct: 453 LMNDISLATQEQSQGLQQINDAVNRIDELTHQNTALASQSNSATGHLQQQIA 504