Pairwise Alignments

Query, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., Aerotaxis receptor from Alteromonas macleodii MIT1002

 Score =  293 bits (751), Expect = 8e-84
 Identities = 185/531 (34%), Positives = 271/531 (51%), Gaps = 26/531 (4%)

Query: 5   MRKNLPVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPD 64
           MR N PVT    +  +   ++S+T     I + N  F++ SGF+ EELIG+ HN++RHPD
Sbjct: 1   MRNNQPVTQKEYKFPAHHRLISSTDKRGVIQHCNSAFVEASGFSREELIGKNHNIIRHPD 60

Query: 65  MPPAAFAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEP 124
           MP   F  MW TL+SG+SW+GLVKNR KNGDHYWVSAF  P+ +   VV Y+SVR     
Sbjct: 61  MPAPVFKEMWRTLESGQSWIGLVKNRRKNGDHYWVSAFVTPVYEGKSVVGYESVRVPALN 120

Query: 125 SHVQAAEKAYAQLRNGKN-ILPKIRLGFHWKLILLVWGSLFASIAIVSLIYPSALMSILF 183
             +  A   YA+++ GK+ + P  RL  +  L+ L    L +++ +++L +     +   
Sbjct: 121 DEIARASSVYARMQEGKSAVSPMSRLAQN--LMHLAPTLLISAVLVIALAFTHGAAA--- 175

Query: 184 LTLLVGSITTLGITYLLVPMKR--------LIQSYCKDSDNPLSQVLYTGRSDEFGQLEF 235
                  I  LG   L++  +         L+    +   N      Y        Q + 
Sbjct: 176 -----AGIALLGAIVLMIAQEAKTRKDWGALLSLSPESYANETVAQTYFPDPPHISQAKL 230

Query: 236 ALRMAQAETSAVIGRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAA 295
           AL    A     + RI DAS  L   AN      E ++    +Q   T+Q+A+A+ +M+ 
Sbjct: 231 ALGCELARNRTALTRIKDASAGLESIANTTHEQAESTSAAVVQQNQATQQIASAVTQMSQ 290

Query: 296 SIQEVATGAKHAANSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIHELEEHSND 355
           +IQEVA   +  A S+ +A     +G Q   QA Q+I  L   V      + EL + ++D
Sbjct: 291 AIQEVAERVESNAKSARTAASNVETGNQKAEQAMQAIVALREAVESISTTVTELAQSTSD 350

Query: 356 ISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQRM 415
           I +   +I +IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA++T++ST  I  +
Sbjct: 351 IGEAANIISTIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASKTRESTDKIHNI 410

Query: 416 IDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQQ 475
           I+ L  R+  AV V       A       ++   AL  I   V  I   +V+M++AV++Q
Sbjct: 411 INELAERSDRAVRVSTEGLASAEHGSAIVEETRGALFEINNAVKGIADATVEMSSAVEEQ 470

Query: 476 SAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQFWE 526
           S V++ IN  +  +        D      + +E     SH+L     Q  E
Sbjct: 471 STVAEHINQQLVEV-------ADGASETQRSSEASLAASHDLRATVNQVHE 514