Pairwise Alignments

Query, 426 a.a., peptidase M23 from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., murein DD-endopeptidase MepM from Pectobacterium carotovorum WPP14

 Score =  266 bits (679), Expect = 1e-75
 Identities = 141/366 (38%), Positives = 216/366 (59%), Gaps = 8/366 (2%)

Query: 45  QPPSSEMVPSDIRLTPLPQPKRIH-YMVKVGDTLSGIFAQLGVPYSILQKILSVDLDHLQ 103
           QP   + +P D     +     +H Y+V  GDTLS I  Q G+  + + ++   + D   
Sbjct: 74  QPSPDDEIPQDELDDKVADEGGVHEYVVSTGDTLSSILTQYGIDIADVTQLAEQNKD--- 130

Query: 104 LDMIQPGEELELMMDDMGQLSRLIYHMSIVEKAIYTRENDGSFSYDFQEISGEWREILFS 163
           L  ++ G+++   + + G L  L + MS  E  IY R     F    + + GEWR  + +
Sbjct: 131 LRNLKIGQQISWALAENGDLQSLTWQMSRRETRIYERVG-ADFKERIETLKGEWRNSVLN 189

Query: 164 GEINGSFSVSARRVGLTSSQVANITQVMKDKIDFSRSLRAGDRFDILVKQQYLGEHNTGN 223
           G ++GSF  SA+  GLTS++V  + + ++ ++DF R LR  D F +L+ ++ L +  +  
Sbjct: 190 GRVSGSFVSSAKNAGLTSTEVREVIKALQWQLDF-RKLRKDDTFSVLMSREML-DGKSEQ 247

Query: 224 SEIKAISFKLAKGDVSAFLAEDGRFYDRAGNSLERAFNRYPVDKAYRQITSGFNPKRKHP 283
           SE+  +       D  A  AEDG+FYDR G+ L R F R+P  K +R I+S FNP+R +P
Sbjct: 248 SELVGVRLNTGGKDYYAIRAEDGKFYDREGSGLTRGFMRFPTMKQFR-ISSNFNPRRLNP 306

Query: 284 VTGRVVPHNGTDFATPIGAPVYSTGDGKVIVVRKHPYAGNYLVIEHNSVYKTRYLHLDKI 343
           VTGRV PH G DFA P+G+PV + GDG+V++ ++   AGNY+ I H   Y TRY+H+ +I
Sbjct: 307 VTGRVAPHKGVDFAMPVGSPVLAVGDGEVVIAKRSGAAGNYVAIRHGRQYTTRYMHMHRI 366

Query: 344 LVKKGQLVKRGQKIALAGATGRLTGPHLHFEVLVRNRPVDAMKADLPIAKSLSSNQKTSF 403
           LVK GQ VKRG +I L+G TGR TGPHLH+E  +  + V+ + A LP ++ L+  ++  +
Sbjct: 367 LVKPGQKVKRGDRIGLSGNTGRSTGPHLHYEFWINQQAVNPLTAKLPRSEGLAGKERRDY 426

Query: 404 LARVSE 409
           LA+V E
Sbjct: 427 LAQVKE 432