Pairwise Alignments

Query, 426 a.a., peptidase M23 from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., murein DD-endopeptidase MepM from Dickeya dianthicola ME23

 Score =  260 bits (665), Expect = 5e-74
 Identities = 144/387 (37%), Positives = 223/387 (57%), Gaps = 16/387 (4%)

Query: 23  PTADEPDQDSYSVPLNQSVNTSQPPSSEMVPSDIRLTPLPQPKRIHYMVKVGDTLSGIFA 82
           PTAD  + +S   PL+Q   TS     E+   D   T         Y+V  GDTLS I  
Sbjct: 92  PTADVTEANSE--PLDQPSTTSGIIKDELDDKDADGTH-------EYVVSTGDTLSSILT 142

Query: 83  QLGVPYSILQKILSVDLDHLQLDMIQPGEELELMMDDMGQLSRLIYHMSIVEKAIYTREN 142
           Q G+  S +  +      +  L  ++ G++L   +D  G L  L +  S  E   YTR  
Sbjct: 143 QYGIDMSDIAALAD---RNAALRNLKIGQQLTWTLDSDGALQTLTWQASRRETRTYTRNG 199

Query: 143 DGSFSYDFQEISGEWREILFSGEINGSFSVSARRVGLTSSQVANITQVMKDKIDFSRSLR 202
           D +F  + + + G+W+  +  G ++GSF+ SA+  GLTSS+V  + + ++ ++DF R LR
Sbjct: 200 D-AFREEIENVEGDWQNKVLIGRLDGSFASSAQAAGLTSSEVREVIRALQWQLDF-RKLR 257

Query: 203 AGDRFDILVKQQYLGEHNTGNSEIKAISFKLAKGDVSAFLAEDGRFYDRAGNSLERAFNR 262
             D F +L+ ++ L +  +  SE++ +  +    +  AF AEDG+FYDR  + L R F R
Sbjct: 258 KDDSFAVLISREIL-DGRSEQSELQGVRLRTGGKNYYAFRAEDGKFYDREASGLTRGFLR 316

Query: 263 YPVDKAYRQITSGFNPKRKHPVTGRVVPHNGTDFATPIGAPVYSTGDGKVIVVRKHPYAG 322
           +P  K ++ I+S FNP+R +PVTGR+ PH G DF+ P+G PV + GDG+V+V  +   AG
Sbjct: 317 FPTMKQFK-ISSNFNPRRLNPVTGRIAPHRGVDFSMPVGTPVLAVGDGEVVVAERDSEAG 375

Query: 323 NYLVIEHNSVYKTRYLHLDKILVKKGQLVKRGQKIALAGATGRLTGPHLHFEVLVRNRPV 382
           N++ + H   Y TRY+H++++LVK GQ +KRG +I L+G TGR TGPHLH+E+ V  + V
Sbjct: 376 NFVAVRHGRQYTTRYMHMNRLLVKPGQRIKRGDRIGLSGNTGRSTGPHLHYELWVNQQAV 435

Query: 383 DAMKADLPIAKSLSSNQKTSFLARVSE 409
           + + A LP ++ L    +  +LA V E
Sbjct: 436 NPLTAKLPRSEGLIGKDRRDYLAHVRE 462