Pairwise Alignments

Query, 426 a.a., peptidase M23 from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., murein DD-endopeptidase MepM from Dickeya dadantii 3937

 Score =  262 bits (669), Expect = 2e-74
 Identities = 142/404 (35%), Positives = 228/404 (56%), Gaps = 26/404 (6%)

Query: 23  PTADEPDQDSYSVPLNQSVNTSQPPSSEMVPSDIRLTPLPQPKRIH-------------- 68
           P A EP   +   P+  S N    P++++  ++    PL QP   +              
Sbjct: 68  PPASEPLDSNPLPPVAASQNVGSAPTADVTEANSE--PLDQPSTTNGIIKDELDDKDADD 125

Query: 69  ---YMVKVGDTLSGIFAQLGVPYSILQKILSVDLDHLQLDMIQPGEELELMMDDMGQLSR 125
              Y+V  GDTLS I  Q G+  S +  +      +  L  ++ G++L   +D  G L  
Sbjct: 126 THEYVVSTGDTLSSILTQYGIDMSDIAALAD---RNAALRNLKIGQQLTWTLDSDGALQT 182

Query: 126 LIYHMSIVEKAIYTRENDGSFSYDFQEISGEWREILFSGEINGSFSVSARRVGLTSSQVA 185
           L + +S  E   YTR  D  F  + + + G+W+  +  G ++GSF+ SA+  GLTSS+V 
Sbjct: 183 LTWQVSRRETRTYTRNGD-VFREEIENVEGDWQNKVLIGRLDGSFASSAQAAGLTSSEVR 241

Query: 186 NITQVMKDKIDFSRSLRAGDRFDILVKQQYLGEHNTGNSEIKAISFKLAKGDVSAFLAED 245
            + + ++ ++DF R LR  D F +L+ ++ L +  +  SE++ +  +    +  AF AED
Sbjct: 242 EVIRALQWQLDF-RKLRKDDSFAVLISREIL-DGRSEQSELQGVRLRTGGKNYYAFRAED 299

Query: 246 GRFYDRAGNSLERAFNRYPVDKAYRQITSGFNPKRKHPVTGRVVPHNGTDFATPIGAPVY 305
           G+FYDR  + L R F R+P  K ++ ++S FNP+R +PVTGR+ PH G DF+ P+G PV 
Sbjct: 300 GKFYDREASGLTRGFLRFPTMKQFK-VSSNFNPRRLNPVTGRIAPHRGVDFSMPVGTPVL 358

Query: 306 STGDGKVIVVRKHPYAGNYLVIEHNSVYKTRYLHLDKILVKKGQLVKRGQKIALAGATGR 365
           + GDG+V+V  +   AGN++ + H   Y TRY+H++++LVK GQ +KRG +I L+G TGR
Sbjct: 359 AVGDGEVVVAERDSEAGNFVAVRHGRQYTTRYMHMNRLLVKPGQKIKRGDRIGLSGNTGR 418

Query: 366 LTGPHLHFEVLVRNRPVDAMKADLPIAKSLSSNQKTSFLARVSE 409
            TGPHLH+E+ V  + V+ + A LP ++ L   ++  +LA V E
Sbjct: 419 STGPHLHYELWVNQQAVNPLTAKLPRSEGLMGKERRDYLAHVRE 462