Pairwise Alignments

Query, 174 a.a., type II secretion system protein from Vibrio cholerae E7946 ATCC 55056

Subject, 162 a.a., MSHA pilin protein MshC from Vibrio cholerae E7946 ATCC 55056

 Score = 42.0 bits (97), Expect = 5e-09
 Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 4/57 (7%)

Query: 5  QGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQAL 61
          +GFTLIEL++ I++LG+++  AA RF+  S  A   T   + A    +L L  S+A+
Sbjct: 6  KGFTLIELVVVIILLGILSAYAASRFLGPSSFAVVTTQSEILA----SLRLTQSRAM 58