Pairwise Alignments

Query, 174 a.a., type II secretion system protein from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., MSHA pilin protein MshA from Vibrio cholerae E7946 ATCC 55056

 Score = 59.7 bits (143), Expect = 3e-14
 Identities = 27/64 (42%), Positives = 44/64 (68%)

Query: 1  MSKNQGFTLIELIIAIVILGVIAVIAAPRFINISKDAKANTMLSVAAGMESALTLLHSQA 60
          M +  GFTLIEL++ IVILG++AV AAPRF+N+  DA+  ++  +   +  A+ + + +A
Sbjct: 4  MKRQGGFTLIELVVVIVILGILAVTAAPRFLNLQGDAREASLEGLRGAVAGAMGISYGRA 63

Query: 61 LIEG 64
           I+G
Sbjct: 64 AIKG 67