Pairwise Alignments

Query, 146 a.a., ribonuclease H from Vibrio cholerae E7946 ATCC 55056

Subject, 160 a.a., Ribonuclease HI (EC 3.1.26.4) from Variovorax sp. SCN45

 Score = 80.5 bits (197), Expect = 1e-20
 Identities = 54/139 (38%), Positives = 72/139 (51%), Gaps = 10/139 (7%)

Query: 5   IYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEALEYAE 64
           IY DGA   N      GG G  +     E   ++       T N  +EL A+IE L   +
Sbjct: 17  IYTDGACKGNP---GPGGWGAWLKSGTTE---KDLFGGELNTTNNRMELTAVIEGLAALK 70

Query: 65  DGD--VIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDELSSR--KYVEV 120
                ++Y DS Y  KG   W+  WK +GW  A K+PVKN +LWQ++D+L +     +E 
Sbjct: 71  RPCKVLLYLDSQYVRKGITEWIRGWKAKGWVTASKQPVKNVELWQRLDKLVTEGGHQIEW 130

Query: 121 FKVKAHSGIEGNERADLLA 139
             VK HSG  GNERAD+LA
Sbjct: 131 RWVKGHSGDPGNERADMLA 149