Pairwise Alignments

Query, 146 a.a., ribonuclease H from Vibrio cholerae E7946 ATCC 55056

Subject, 144 a.a., Ribonuclease HI (EC 3.1.26.4) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 80.5 bits (197), Expect = 1e-20
 Identities = 54/139 (38%), Positives = 72/139 (51%), Gaps = 10/139 (7%)

Query: 5   IYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAELELLALIEALEYAE 64
           IY DGA   N      GG G+ +  E  E   +E     R+T N  +EL A+IE L   +
Sbjct: 6   IYTDGACKGNP---GPGGWGVYLKSEGFE---KELWGGERETTNNRMELTAVIEGLAALK 59

Query: 65  DGDVI--YSDSDYCVKGFNIWMDDWKDRGWRRADKKPVKNRQLWQQVDEL--SSRKYVEV 120
               +  Y DS Y  +G   W+  WK +GW  A K+PVKN  LW+++D L  +    +E 
Sbjct: 60  RPCQVSLYLDSQYVRQGITEWIHGWKRKGWVTASKQPVKNADLWRKLDGLVHAGPHQIEW 119

Query: 121 FKVKAHSGIEGNERADLLA 139
             VK H+G  GNERAD LA
Sbjct: 120 HWVKGHAGDPGNERADALA 138