Pairwise Alignments

Query, 66 a.a., AlpA family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 70 a.a., CP4-57 prophage; DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

 Score = 50.8 bits (120), Expect = 2e-12
 Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 5/63 (7%)

Query: 1  MRFLRLKDVMSLTGLGRSTIYKFMADETD-----FPKSVPLGGRAVAWVESEIEEWMESR 55
          +R LRL  V+  TG+ R+TIY ++  ++      FPK   LG ++V W+E+EI+EW+  R
Sbjct: 7  VRILRLPAVIQKTGMARATIYDWLNPKSPRYDATFPKKRMLGVKSVGWIEAEIDEWLSQR 66

Query: 56 LSM 58
            +
Sbjct: 67 CKL 69