Pairwise Alignments

Query, 586 a.a., hemolysin from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Putative hemolysin from Variovorax sp. SCN45

 Score = 42.7 bits (99), Expect = 2e-08
 Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 32/228 (14%)

Query: 346 DIDRFDRDYLHLFIWDREKNQLVGAYRLGLVDKLIEHKGISGLYSSTLFHYDQRFLNNMG 405
           DID FD    HL + D    Q++G YR   V    + + +   YS T F    R  +   
Sbjct: 94  DIDLFDDFCEHLLVRDELTQQVIGTYR---VLTPAQARRVGSTYSDTEFDL-TRLRDLRE 149

Query: 406 NAIEMGRSVIDSQYQKSMAALLLLWKGIGTYVERHPQYTHLFGPVSISNDYSEQARRLLA 465
             +E+GRS +  ++++    +L LW  +  ++ R+   T + G  SI   ++       A
Sbjct: 150 RMVELGRSCVHPEHRQG-GVILALWGALAGFMHRNKLDT-MIGCASIPMSHNGVTNGDAA 207

Query: 466 DTMTLHYYDSEQAEL---VMATNPLPTGQAQWNASLLTSLADLQLLSRVIARIDEGKGIP 522
            ++      S  A +   V    PLP  +       L S  D++               P
Sbjct: 208 ASIWRQVSASHMAPIQYQVQPRLPLPVER-------LDSTLDVE--------------PP 246

Query: 523 VLLRQYLGLNGKLVSFNV-DPAFNNALDGLIVVDLRNVPTKTLARYMG 569
            L++ YL L  K++     DP F NA D  +++ + ++P +    ++G
Sbjct: 247 ALIKGYLRLGAKVLGAPAWDPDF-NAADLPMLMRIDDLPARYRKHFLG 293