Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., TRAP transporter solute receptor, unknown substrate 6 from Variovorax sp. SCN45

 Score =  193 bits (490), Expect = 7e-54
 Identities = 107/316 (33%), Positives = 178/316 (56%), Gaps = 4/316 (1%)

Query: 37  LAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVFDMVKSGQYDLGH 96
           LA ++  +   +  + + ++K    +S G+ +I +  A +     GV D ++    ++  
Sbjct: 34  LASSFPRSLDTIFGSAEMLSKTVKALSGGKFEISVHPAGELMPAFGVVDALQGDTLEMAQ 93

Query: 97  SSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYAPHNLLSFPGGNSDI 156
           +++YY+ GK P   F  ++PFG+ A +  +W  YG G  L++  +A +N  +   GN+  
Sbjct: 94  TAAYYFTGKDPIFAFSCAVPFGLTARQTDSWKEYGNGRKLLDAFFAQYNFRTASAGNTGT 153

Query: 157 QMGGWFKKEINSVDDLQGLKMRI-PGFAGEVLAKLGAKPTNIAPGELYTSLERGTIDALE 215
           QMGGW++KEI +V DL+GLKMR+  G  GE +AKLG    N+  G++Y +LE+GT+DA E
Sbjct: 154 QMGGWYRKEIKTVADLKGLKMRMGGGVFGEAMAKLGVVSQNMPAGDVYQALEKGTLDAAE 213

Query: 216 WVGPAFDLRMGFHKIAP-YYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVAAF 274
           +VGP  D ++GF+K+AP YYY  W E G++ +F +N K +  L  + + IL+ A +VAA 
Sbjct: 214 FVGPYDDEKLGFNKVAPYYYYPGWWEGGADLEFFINNKAFAKLSDENKAILDAATKVAAR 273

Query: 275 DMYNQAIDANATSWAAMKSEYPDIKVRDFPPAVLAALRQANNELLQEQAASDPLAKEIID 334
           DM  +    N  +   + +   ++K   FP AV+ A  +A+ E+  E  A  P  K+I  
Sbjct: 274 DMIAKYDAYNPVALKRLVAAKTELK--PFPKAVMDAGFKASMEVFAEHEAKSPEFKKIHQ 331

Query: 335 SQQAYLTKVRDWTRIS 350
             +A+      W R S
Sbjct: 332 DMRAFQRDQILWNRFS 347