Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

 Score = 50.1 bits (118), Expect = 9e-11
 Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 10/176 (5%)

Query: 163 KKEINSVDDLQGLKMRI---PGFAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGP 219
           ++ I   DD+ GLK+R+   P +  +V + LGA  T +   ELY +LE+  +D  E    
Sbjct: 161 RRPITRADDITGLKIRVIQSPIYI-DVFSALGANATPLPFPELYPALEQKAVDGQENPNT 219

Query: 220 AFDLRMGFHKIAPYYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVAAFDMYNQ 279
              L   F ++  Y     H    +   L++KK WD++  + + IL  A   A   ++ +
Sbjct: 220 TI-LSSKFSEVQKYITQTRHIYNPQA-LLISKKTWDSMSAEEKKILTQASNEAT--VFQR 275

Query: 280 AIDANATSWAAMKSEYPDIKVRDFPPAVLAALRQANNELLQEQAAS--DPLAKEII 333
           A    A   A    +   + V +  P  +  LR     ++ + AAS  D   KE++
Sbjct: 276 AASRGAADGALDALKKAGMTVSEISPEEMTKLRAKVKPVIDKYAASVGDTTVKELM 331