Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., TRAP transporter substrate-binding protein from Variovorax sp. OAS795

 Score = 50.8 bits (120), Expect = 5e-11
 Identities = 68/250 (27%), Positives = 102/250 (40%), Gaps = 27/250 (10%)

Query: 56  AKLAAEMSNGRIQIRIDS-ANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSS 114
           AK     + G+++I + + A+  KAP  +   V+SGQ   G      +  + P       
Sbjct: 44  AKDVDAATGGKVKIAVHANASLFKAP-EIKRAVQSGQAQAGEILLANYANENP-IYALDG 101

Query: 115 MPFGMIATEQYAWFYYGGGMPLMEKVYAPHN---LLSFPGGNSDIQMGGWFKKEINSVDD 171
           +PF +  T   A   Y    P MEK+ A      L   P     I    + KKEI+SV D
Sbjct: 102 VPF-LATTYPEARKLYDASKPAMEKLLAAQGIKVLFVVPWAPQGI----YSKKEISSVAD 156

Query: 172 LQGLKMRIPGFAGEVLAKL-GAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKI 230
           L+G+K R    A   +A+L GA+P  I   EL  ++  G I++    G        +  I
Sbjct: 157 LRGIKWRAYSPATAKIAELIGAQPVQIQQAELSAAMATGVIESYMSSGSTGYDTKTYEHI 216

Query: 231 APYYYT-AWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVAAFDMYNQAIDANATSWA 289
             +Y T AW     +   LVN K +D L    +  +  A           A DA A  W 
Sbjct: 217 KNFYDTQAWI---PKNAILVNAKAFDALDAATKAAVTKA-----------AADAEARGWK 262

Query: 290 AMKSEYPDIK 299
             + +  + K
Sbjct: 263 IAQEKNDEYK 272