Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., TRAP transporter substrate-binding protein from Variovorax sp. OAS795

 Score =  151 bits (382), Expect = 2e-41
 Identities = 99/336 (29%), Positives = 165/336 (49%), Gaps = 7/336 (2%)

Query: 15  ALVLSTVLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSA 74
           A V +  +     +      L    TW A   I  +  ++ AK   +M+  R++I +  A
Sbjct: 16  AAVAAGAMSAPMVSMAQTTSLRFQSTWPAKD-IFHEYAQDFAKKVNDMAGNRLKIEVLPA 74

Query: 75  NKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMP-FGMIATEQYAWFYYGGG 133
                   + D V  G  D GH    YW GK      + S P +GM A    AW  YGGG
Sbjct: 75  GSVVPAFQLLDAVAKGTLDGGHGVVAYWYGKNSALALWGSGPGYGMDANMVLAWHNYGGG 134

Query: 134 MPLMEKVYAPHNL--LSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLG 191
             L+E++Y   NL  +S+  G    Q  GWFKK +  V+D++GLK R  G A +V   +G
Sbjct: 135 KALIEEIYKSLNLDVVSYLYGPMPTQPLGWFKKPVARVEDMKGLKFRTVGLAVDVFTDMG 194

Query: 192 AKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAP-YYYTAWHEPGSETQFLVN 250
                +  GE+  +L+RG IDA E+   + D  +GF  +A      ++H+ G + + L N
Sbjct: 195 TAVNPLPGGEIVPALDRGLIDAAEFNNASSDRVLGFPDVAKNCMLQSFHQSGEQFEILFN 254

Query: 251 KKKWDTLPKDIQVILETAFRVAAFDMYNQAIDANATSWAAMKSEYPDIKVRDFPPAVLAA 310
           K K   L  +++ I++ A + ++ DM  +AI  N+  +  +K     IK    P A+L A
Sbjct: 255 KGKLAALAPELKSIIDYAVQASSADMSWKAIQRNSQDYIELKK--AGIKFYKTPDAILRA 312

Query: 311 LRQANNELLQEQAASDPLAKEIIDSQQAYLTKVRDW 346
              + ++ + +++A +P+ K+++DSQ+A+  +   W
Sbjct: 313 QLASWDKTIAKKSAENPMFKKVLDSQKAFAERAGQW 348