Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 45/185 (24%), Positives = 79/185 (42%), Gaps = 10/185 (5%)

Query: 163 KKEINSVDDLQGLKMRI---PGFAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGP 219
           ++ IN ++DLQGLK+R+     F  +   +LGA P  +   E+Y++LE   ID  E   P
Sbjct: 163 RRPINKLEDLQGLKLRVIQNKTFI-DTFTQLGANPVPMPFTEVYSALETKAIDGQE--NP 219

Query: 220 AFDLRMGFHKIAPYYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVAAFDMYNQ 279
              L+         +        S   F+ +K ++D L  D Q  L+             
Sbjct: 220 VAFLQTSKLYEVQKHVALTRHVYSPVNFIYSKTQYDKLAPDEQKALKDCAMENRLVNRQL 279

Query: 280 AIDANATSWAAMKSEYPDIKVRDFPPAVLAALRQANNELLQEQAASDPLAKEIIDSQQAY 339
             D    S A +K++   + + +   A L  +R+    +   Q A   L  ++I++  A 
Sbjct: 280 GRDMEDKSAAYLKTQ--GVAITEPSKAELERMREKTKVVYANQTA--VLGPDLINALNAE 335

Query: 340 LTKVR 344
           + K+R
Sbjct: 336 VKKIR 340