Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 19/253 (7%)

Query: 25  AQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVF 84
           AQA +     L  A +   + P LG   K  A   A+ S G++++ +       +     
Sbjct: 28  AQAQDVKERTLRFAFSLAQDHP-LGTGAKKFADAVAQKSGGKMKVALFPGAVLGSDPQNL 86

Query: 85  DMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYAPH 144
             ++ G  D    ++          + F        A E YA      G  LM+ + APH
Sbjct: 87  SAIRGGTLDFTSMATGLVASIDKQQMVFDLPFLFNNAQEAYAIADGPVGRRLMDDL-APH 145

Query: 145 NLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRI---PGFAGEVLAKLGAKPTNIAPGE 201
            ++     +   +     ++ I   +D+QGLK+R+   P F  ++   LGA P  +  GE
Sbjct: 146 GVIGLGVWDLGFRHLTNSRRPIARQEDIQGLKIRVIASPIFI-DLFTTLGANPVPMTFGE 204

Query: 202 LYTSLERGTIDALE-----WVGPAFDLRMGFHKIAPYYYTAWHEPGSETQFLVNKKKWDT 256
           LY +LE  T+D  +          F     F  ++ + YT           L++KK WD 
Sbjct: 205 LYGALESRTVDGQDNPLGVIESAKFAEVQKFLSLSRHVYTG-------MPLLMSKKTWDG 257

Query: 257 LPK-DIQVILETA 268
           + + + ++I E+A
Sbjct: 258 MSETERRIIRESA 270