Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  254 bits (649), Expect = 3e-72
 Identities = 137/352 (38%), Positives = 204/352 (57%), Gaps = 3/352 (0%)

Query: 6   YLNKSRIMLALVLSTVLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNG 65
           +L  + +  A   +T+   A A   P  K  LA ++  +   +  A + +AK  AE ++G
Sbjct: 6   FLTGAAVGAAAASTTIAAPAIAQSMPEIKWRLASSFPKSLDTIYGAGEVLAKRVAEATDG 65

Query: 66  RIQIRIDSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQY 125
           + QIR+ +  +    L V D V++G  + GH+ SYY+ GK     F +SMPFG    +Q 
Sbjct: 66  KFQIRVFAGGEIVPGLQVLDAVQNGTVECGHTVSYYYVGKDATFGFDASMPFGANTRQQN 125

Query: 126 AWFYYGGGMPLMEKVYAPHNLLSFPGGNSDIQMGGWFKKEINSVDDLQGLKMRIPGFAGE 185
           +W Y+GGGM LM + +A +N+L+FP GN+  QMGGWF+KEI +V+DL+GLK RI G+AG+
Sbjct: 126 SWLYHGGGMALMREFFAKYNMLNFPCGNTGTQMGGWFRKEIKTVEDLKGLKFRIGGYAGK 185

Query: 186 VLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAP-YYYTAWHEPGSE 244
           VL KLG  P  IA G+LY +LE+GTIDA EWVGP  D ++GF+K+AP YYY  W E G  
Sbjct: 186 VLTKLGVVPQQIAGGDLYPALEKGTIDAAEWVGPYDDEKLGFNKVAPYYYYPGWWEGGPC 245

Query: 245 TQFLVNKKKWDTLPKDIQVILETAFRVAAFDMYNQAIDANATSWAAMKSEYPDIKVRDFP 304
              LVNK +W+ LPK  + + E A   A  DM  +    N  +   + +     ++R F 
Sbjct: 246 VSALVNKNEWEKLPKHYKAVFEAAAAEANLDMSAKYDVLNPPALKRLIAN--GTQLRPFS 303

Query: 305 PAVLAALRQANNELLQEQAASDPLAKEIIDSQQAYLTKVRDWTRISTQAYLN 356
             ++ A  +A  E   E+ A++P  K++ D   AYL + R W  ++   + N
Sbjct: 304 KDIMLACYKAAQETYAEECAANPAFKKVFDHWSAYLAEQRSWFSVAEAGFDN 355