Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., C4-dicarboxylate ABC transporter from Magnetospirillum magneticum AMB-1

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 71/300 (23%), Positives = 111/300 (37%), Gaps = 44/300 (14%)

Query: 15  ALVLSTVLGTAQANEPPVYKLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRI--- 71
           A+    + G+A A +     +  +     +TP  G   +   KLA E + GR+++ +   
Sbjct: 10  AIAACVLAGSAMAQQAQPIVIKFSHVVAPDTP-KGKGAEYFKKLAEERTKGRVKVEVYPN 68

Query: 72  -----DSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYA 126
                D        LG   M+       G                    P G+   E + 
Sbjct: 69  SQLYKDKEEMEALQLGAVQMLAPSLAKFG--------------------PLGVKEFEVFD 108

Query: 127 WFYYGGGMPLMEKVYAPH---NLLSFPGGNSDIQMGGW---FK-----KEINSVDDLQGL 175
             Y      ++  V       +LL    G   I +  W   FK     K I +  DL+G+
Sbjct: 109 LPYIFPSKDVLRSVTGGPVGASLLKKLEGKGIIGLAYWDNGFKIMSANKPIKAPSDLKGV 168

Query: 176 KMRIPG--FAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLRMGFHKIAPY 233
           KMRI         +  LGA P  +A  E+Y +L+ G +D  E   P+       H++  +
Sbjct: 169 KMRIQSSKVLDAEMRALGALPQVMAFSEVYQALQTGVVDGTE-NPPSNMYTQKMHEVQKH 227

Query: 234 YYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVAAFDMYNQAIDANATSWAAMKS 293
             T  +        +VNKK W+ LP DI+  LE A   A+      A   N  +  AMK+
Sbjct: 228 A-TMTNHGYLGYAVIVNKKFWEGLPADIRATLEGAMSEASVFANAIAQTENDDAVKAMKA 286