Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., TRAP-type C4-dicarboxylate transport system from Magnetospirillum magneticum AMB-1

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 71/295 (24%), Positives = 133/295 (45%), Gaps = 38/295 (12%)

Query: 57  KLAAEMSNGRIQIRIDSANK-HKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNTLFFSSM 115
           ++AAE  N RI+ +I  A +    P  + D V++G  D+  ++  Y  G+ P  +    +
Sbjct: 75  RVAAESGN-RIKCQIFPAMQLGGTPSQLVDQVRNGVADIVWTAPGYSAGRFP-AIEALEL 132

Query: 116 PFGMIAT----EQYAWFYYGGGMPLMEKVYAPHNLLSFPGGNSDIQMGGWF---KKEINS 168
           PF M+A      +  W YY       +  +A + +L+       I  GG F     E+ S
Sbjct: 133 PF-MVANALDGSRMTWDYYN---QFAKDEFAAYKVLAV-----HIDGGGLFHTANTEVKS 183

Query: 169 VDDLQGLKMRIPG-FAGEVLAKLGAKPTNIAPGELYTSLERGTIDA--LEW--VGPAFDL 223
           + +++GLK+R P   A + L  LG  P ++ P ++  ++ +G +D   L W  + P    
Sbjct: 184 LAEVKGLKLRTPTRLAAKTLQSLGGVPVSMPPSQVADAIAKGVVDGGLLPWELMRPTKID 243

Query: 224 RMGFHKIAPYYYTAWHEPG------SETQFLVNKKKWDTLPKDIQVILETAFRVAAFDMY 277
            +  + IAP        PG      +    L+NK K+D+LP D++ +++        + +
Sbjct: 244 EVTKYHIAP-------PPGRPFPVATVLSVLMNKAKYDSLPADLKAVIDRNSGPVLVEAF 296

Query: 278 NQAIDANATSWAAMKSEYPDIKVRDFPPAVLAALRQANNELLQEQAASDPLAKEI 332
            +  D    +     +  P  +V +  PA   A+R A    ++E+   D  A+++
Sbjct: 297 GKVWDDVTAANLKYAATIPGTQVTNLEPAPYQAMRDAAKP-VEEEWVKDVTARKL 350