Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component from Kangiella aquimarina DSM 16071

 Score =  250 bits (639), Expect = 4e-71
 Identities = 124/322 (38%), Positives = 195/322 (60%), Gaps = 3/322 (0%)

Query: 34  KLTLAETWGANTPILGDAPKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVFDMVKSGQYD 93
           K T+  TW  N   LG+  + +AKL  ++S GR+++++  A +    L VF+ V +G   
Sbjct: 43  KWTMVTTWPKNFAGLGEGAEYLAKLIGQLSGGRMEVKVYGAGELVPALQVFEAVATGAAQ 102

Query: 94  LGHSSSYYWKGKVPNTLFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYAPHNLLSFPGGN 153
           +GH ++YYW GK+  + FF+++PFG+ A E   W  +GGG+ L  ++YAP NL+  P GN
Sbjct: 103 MGHGAAYYWSGKLSMSPFFAAVPFGLNAQEMNGWLLHGGGIELWRELYAPFNLIPEPAGN 162

Query: 154 SDIQMGGWFKKEINSVDDLQGLKMRIPGFAGEVLAKLGAKPTNIAPGELYTSLERGTIDA 213
           + +QM GWF KEINS+DD++GLKMRIPG  GEV  + G  P  +   E++TSLE G IDA
Sbjct: 163 TGVQMAGWFNKEINSMDDIKGLKMRIPGLGGEVWKRAGGIPVLMPGSEVFTSLETGAIDA 222

Query: 214 LEWVGPAFDLRMGFHKIAP-YYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETAFRVA 272
            EWVGP  DL  G  K A  YYY  W EPGS  + L+NK+ ++ LP+D+Q ++  A RV 
Sbjct: 223 AEWVGPYNDLAFGLFKAAKYYYYPGWQEPGSTLEALINKEAFEALPQDLQDVVRHACRVT 282

Query: 273 AFDMYNQAIDANATSWAAMKSEYPDIKVRDFPPAVLAALRQANNELLQEQAASDPLAKEI 332
             DM       N  +   + +++  +++++ P  VL  L+  +  +++EQA ++ L + I
Sbjct: 283 NADMLAHFTSENNKALQTLVNKH-GVQLKELPKDVLNELQTISEAMIEEQAKTE-LDQRI 340

Query: 333 IDSQQAYLTKVRDWTRISTQAY 354
           + S + +  + + W  +S  +Y
Sbjct: 341 LKSFKEFRDQAKSWHEVSEVSY 362