Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Solute-binding protein from Azospirillum sp. SherDot2

 Score = 53.5 bits (127), Expect = 8e-12
 Identities = 55/228 (24%), Positives = 98/228 (42%), Gaps = 19/228 (8%)

Query: 50  DAPKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNT 109
           +A + + KL AE SNG++ I++             + +K G  ++   +       VP T
Sbjct: 50  EAVRYVGKLVAERSNGKLGIKVFPNGALGTEKDTIEQLKIGALEMMRINVAPLNNVVPET 109

Query: 110 LFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYAPHN------LLSFPGGNSDIQMGGWFK 163
           +  +++PF    T        G   P+ +++ A         L  +  G+  +       
Sbjct: 110 MV-TALPFIFRDTGHMRRVLDG---PIGDEILAAMESQGMIGLAFYDSGSRSMYSAA--- 162

Query: 164 KEINSVDDLQGLKMRIPG---FAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPA 220
           K   ++ D++G K+R+     F   + A LGA  T +  GE+YT+L+ G +DA E   P+
Sbjct: 163 KPYKTLADMKGAKIRVQQSDLFVAMIQA-LGANATPMPFGEVYTALKTGIVDAAENNYPS 221

Query: 221 FDLRMGFHKIAPYYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETA 268
           ++    F   A  Y+T      +    + +K  WD L KD Q  +  A
Sbjct: 222 YESSRHFE--AAKYFTLTEHAMAPEVLVFSKVAWDRLSKDDQATVRKA 267