Pairwise Alignments

Query, 359 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., C4-dicarboxylate-binding protein from Agrobacterium fabrum C58

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 11/224 (4%)

Query: 50  DAPKNMAKLAAEMSNGRIQIRIDSANKHKAPLGVFDMVKSGQYDLGHSSSYYWKGKVPNT 109
           +A K M +L AE S GRI+I++ + +         +  + G  D+   ++  +   V  T
Sbjct: 42  EAVKYMGELLAERSKGRIKIQVMNNSVLGGEKDTIEQTRFGVIDMNRVNAAPFNNLVKET 101

Query: 110 LFFSSMPFGMIATEQYAWFYYGGGMPLMEKVYA---PHNLLSFPGGNSDIQMGGWFKKEI 166
                +PF   +TE       G   P+ ++V A   PH L+     +S  +     KK I
Sbjct: 102 TVLG-LPFLFRSTEHMHNTVDG---PIGDEVLAAFEPHGLIGLAFYDSGARSFYTTKKPI 157

Query: 167 NSVDDLQGLKMRIP--GFAGEVLAKLGAKPTNIAPGELYTSLERGTIDALEWVGPAFDLR 224
             + DL+GLK+R+        ++   GA PT +  GE+Y+SLE G +D  E   P+++  
Sbjct: 158 EKLADLKGLKIRVQQSDLWISMMQAFGANPTPMPMGEVYSSLETGVVDGAENNWPSYE-S 216

Query: 225 MGFHKIAPYYYTAWHEPGSETQFLVNKKKWDTLPKDIQVILETA 268
              +++A  Y    H    E   +++K  +D L  + Q +L  A
Sbjct: 217 ARHYEVAKNYSLTEHSLNPEI-LVISKISYDKLSPEDQKLLRQA 259