Pairwise Alignments

Query, 260 a.a., DeoR/GlpR transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 255 a.a., DNA-binding transcriptional repressor YgbI from Escherichia coli ECRC62

 Score =  110 bits (276), Expect = 2e-29
 Identities = 73/249 (29%), Positives = 131/249 (52%), Gaps = 6/249 (2%)

Query: 13  RRHTIVKLVNEQGEVSVEALSSQFETSEVTIRKDLASLEKNGQLLRRYGGAIALPKEVMH 72
           RR  I+++V E+G VS+  L+ +   S +TIR+DL  LE+ G ++   GG +  P  V H
Sbjct: 6   RRQIILEMVAEKGIVSIAELTDRMNVSHMTIRRDLQKLEQQGAVVLVSGG-VQSPGRVAH 64

Query: 73  DELNEKVSV----RKISLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVMTNSL 128
           +  ++  +     +K ++ K AA L++  + I +D+G+TT A+ Q L     L V+TN  
Sbjct: 65  EPSHQVKTALAMTQKAAIGKLAASLVQPGSCIYLDAGTTTLAIAQHLIHMESLTVVTNDF 124

Query: 129 HVANALNELENEPTLLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLDRGTT 188
            +AN L +  N  T++ TGG     + S  G+ A ++LRS   DQ FI A    +   +T
Sbjct: 125 VIANYLLDNSN-CTIIHTGGAVCRENRSCVGEAAATMLRSLMIDQAFISASSWSVRGIST 183

Query: 189 TFNELVGLSKVMAEVSREVIVMIESDKVGRKIPNLELSWDNIDVLVTDHELSDEFAKQIE 248
              + V + + +A  SR+ +++ ++ K G+    L L     D ++TD  L +  ++ + 
Sbjct: 184 PAEDKVTVKRAIASASRQRVLVCDATKYGQVATWLALPLSEFDQIITDDGLPESASRALA 243

Query: 249 SHQVRVIRA 257
              + ++ A
Sbjct: 244 KQDLSLLVA 252