Pairwise Alignments

Query, 260 a.a., DeoR/GlpR transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., Glucitol operon repressor from Alteromonas macleodii MIT1002

 Score =  225 bits (573), Expect = 9e-64
 Identities = 118/263 (44%), Positives = 170/263 (64%), Gaps = 11/263 (4%)

Query: 6   SKRNTQLRRHTIVKLVNEQGEVSVEALSSQFETSEVTIRKDLASLEKNGQLLRRYGGAIA 65
           S ++ + RR  IV  V E G+  VE L+ +F TSEVTIRKDLA+L + G L+R++GGA+ 
Sbjct: 3   SSKSVEQRRQQIVAWVKEHGQSQVEDLAVRFATSEVTIRKDLAALSQQGLLIRQFGGAVP 62

Query: 66  LPKEVMHDE-----------LNEKVSVRKISLAKAAAKLIRDHNRIVIDSGSTTAALIQQ 114
           +P     +             N   S    ++ + AA L++  N++VID GSTTA+++  
Sbjct: 63  VPSSTNSNAGPSQFITSDPFANSTTSPAINAIGQLAASLVKPGNKLVIDCGSTTASILPH 122

Query: 115 LNDKRGLVVMTNSLHVANALNELENEPTLLMTGGTWDTHSESFQGKVAESVLRSYDFDQL 174
           L+    LVVMTN+L  AN L + E EPT+LM GGTWD  S+SFQG +AE ++ +Y FD  
Sbjct: 123 LSHADDLVVMTNTLSTANYLTQSEKEPTVLMVGGTWDAQSQSFQGAMAEQLVSAYSFDFA 182

Query: 175 FIGADGIDLDRGTTTFNELVGLSKVMAEVSREVIVMIESDKVGRKIPNLELSWDNIDVLV 234
           FIGA GID++RGTTTFNEL+G+++ MA  + +V+++  S K+  K+PNLELSW NI VL+
Sbjct: 183 FIGAAGIDVNRGTTTFNELIGVTRAMAVAASKVVIVASSKKLTHKMPNLELSWKNISVLI 242

Query: 235 TDHELSDEFAKQIESHQVRVIRA 257
           TD  + ++    IE+  V V+ A
Sbjct: 243 TDEGICEQDKLNIENQGVTVLIA 265