Pairwise Alignments

Query, 298 a.a., chromosome initiation inhibitor from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  188 bits (477), Expect = 1e-52
 Identities = 105/274 (38%), Positives = 159/274 (58%), Gaps = 7/274 (2%)

Query: 5   DYRWIEALDSVVSKGSFERAAEQLFISQSAVSQRIKQLEKYLAQPVLIREQPPRPTLVGK 64
           DY+ + AL +VV +  FERAA+ L +SQSA+SQRIK LE  + QPVL+R  PP PT +G+
Sbjct: 3   DYKLLSALAAVVEQAGFERAAQVLGLSQSAISQRIKLLEARVGQPVLVRATPPMPTDIGR 62

Query: 65  KLLGLYRRVCLIEQEL---VPELTNQEHVRPVSMSIATNADSLATWLLPALDKVMKSRQV 121
           +LL   ++V L+E++L   VP L   E   P  + IA NADSLATW   A+      + +
Sbjct: 63  RLLNHVQQVRLLERDLQSQVPAL--DEEGMPERLRIALNADSLATWWAEAVSGFCAEQHL 120

Query: 122 ELNLVIYGESRTLDKLKNGEVVGAISLEPQPITGCSAEYLGQMEYLCVASPEFYQKYFAK 181
            L+LV+  ++  L +++ GEV   I    +P+ G  +  LG M Y  +ASP F  ++F +
Sbjct: 121 LLDLVVEDQTVGLKRMRAGEVAACICASERPVAGARSLLLGAMRYRALASPAFVARHFPQ 180

Query: 182 GVTPRSLIKAPAVSYDQYDELHNKFLWDYFAVPRDKVINHTVGSSEAFVRLALSGAAYCL 241
           GV    L + PA+ +   D L +++L            +H   SSE F+RL  +G  + L
Sbjct: 181 GVRADQLARTPALVFGPDDFLQHRYLASLGV--DGGFEHHLCPSSEGFIRLTEAGLGWGL 238

Query: 242 IPRLQIISELESGALINMTPDFMLSYPIFWHHWQ 275
           +P LQ+  +LE G L+ + PD  +  P++WHHW+
Sbjct: 239 VPELQVRDQLEKGILVELLPDKPIDVPLYWHHWR 272