Pairwise Alignments

Query, 298 a.a., chromosome initiation inhibitor from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 69/272 (25%), Positives = 119/272 (43%), Gaps = 22/272 (8%)

Query: 4   LDYRWIEALDSVVSKGSFERAAEQLFISQSAVSQRIKQLEKYLAQPVLIRE-QPPRPTLV 62
           ++ R++EA       GSF  A+++L I+Q+AVS R+  LE+ +   +  R+ +  R T V
Sbjct: 1   MNTRFVEAFLWAARLGSFRAASDRLHITQAAVSNRVASLEEDIGARLFERDARELRLTPV 60

Query: 63  GKKLLGLYRRVCLIEQELVPELTNQEHVRPVSMSIATNADSLATWLLPALDKVMKSRQVE 122
           G +L+    R+  + +E+V     +E +  + + I      + TWLL  L  +   R   
Sbjct: 61  GVRLMDYGERLLELRREIVSLGRPREDLLGL-VRIGAIETVVHTWLLGFLTNL---RSTY 116

Query: 123 LNLVIYGESRTLDKLKNGEVVGA--ISLEPQPITGCSAEYLGQMEYLCVASPEFYQKYFA 180
             + +   S T   L  G   GA  I+L+   I G      G +   C+  P  +    A
Sbjct: 117 PGIEVQLTSETTLALHRGLREGALDIALQTDHIAGA-----GIVSTPCLPMPMGW--VGA 169

Query: 181 KGVTP----RSLIKAPAVSYDQYDELHN--KFLWDYFAVPRDKVINHTVGSSEAFVRLAL 234
            G  P      L++ P ++     + H   K L+    +P  KV  H V S  A  RL  
Sbjct: 170 PGAEPVQTVDQLLRQPVLTMSPGSQPHEALKNLYRAVGIPLGKV--HCVSSISALARLVK 227

Query: 235 SGAAYCLIPRLQIISELESGALINMTPDFMLS 266
           +G    L+P   +   + +G +  +  D ++S
Sbjct: 228 AGFGNALVPLPPVYEYVAAGDVRIVECDALIS 259