Pairwise Alignments

Query, 298 a.a., chromosome initiation inhibitor from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., putative HTH-type transcriptional regulator from Pseudomonas sp. RS175

 Score =  161 bits (408), Expect = 1e-44
 Identities = 91/271 (33%), Positives = 148/271 (54%), Gaps = 1/271 (0%)

Query: 4   LDYRWIEALDSVVSKGSFERAAEQLFISQSAVSQRIKQLEKYLAQPVLIREQPPRPTLVG 63
           LD + +EA   V+   SFERAA  L I+  A+SQRIK LE  L+  ++IRE+P  PT  G
Sbjct: 2   LDRQQLEAFACVIEHKSFERAASALNITSGAISQRIKSLENSLSTILVIRERPIHPTSAG 61

Query: 64  KKLLGLYRRVCLIEQELVPELTNQEHVRPVSMSIATNADSLATWLLPALDKVMKSRQVEL 123
           + LL     +  +E +++  L+ + +     ++I  + DSL TW  P L ++M++ QV +
Sbjct: 62  QALLQHVSALRSLEHDVLRLLSRKGNTNS-KIAIGVHPDSLNTWFAPLLIELMRAEQVCV 120

Query: 124 NLVIYGESRTLDKLKNGEVVGAISLEPQPITGCSAEYLGQMEYLCVASPEFYQKYFAKGV 183
            ++      +L+ LK G+V G +S+   P+ G     LG MEY CV++P++ ++Y A+G+
Sbjct: 121 EIISDDRCSSLNILKRGDVQGCVSVVADPLDGFEVHPLGAMEYKCVSTPDYMRRYLARGM 180

Query: 184 TPRSLIKAPAVSYDQYDELHNKFLWDYFAVPRDKVINHTVGSSEAFVRLALSGAAYCLIP 243
              SL+ APA++  + D  H  FL +   V  ++   H + S        L+G  Y L+P
Sbjct: 181 GTHSLLDAPAITRGRNDTRHTAFLRELLGVSIERFPCHYLPSLPMVQDAVLAGLGYTLMP 240

Query: 244 RLQIISELESGALINMTPDFMLSYPIFWHHW 274
                  LE G L+++ PD     P++WH W
Sbjct: 241 ADVAAPLLEEGQLVDLMPDSSYREPLYWHGW 271