Pairwise Alignments

Query, 298 a.a., chromosome initiation inhibitor from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

 Score =  161 bits (408), Expect = 1e-44
 Identities = 101/298 (33%), Positives = 161/298 (54%), Gaps = 7/298 (2%)

Query: 4   LDYRWIEALDSVVSKGSFERAAEQLFISQSAVSQRIKQLEKYLAQPVLIREQPPRPTLVG 63
           LDY  + A+  V   GSFE+AA+ L ++ SAVSQRIKQLE+ L   +++R  P   T  G
Sbjct: 2   LDYPSMRAVALVARTGSFEKAAQVLCVTPSAVSQRIKQLEERLGVVLIVRGNPCVATEKG 61

Query: 64  KKLLGLYRRVCLIEQEL---VPELTNQEHVRP-VSMSIATNADSLATWLLPALDKVMKSR 119
           + L      V ++E EL   +P LT     +  V+++IATNADSL TW L A+ K     
Sbjct: 62  EWLCRHMDHVGMLESELFRQLPALTEAGDAQERVTLNIATNADSLGTWFLDAVSKFTGGS 121

Query: 120 QVELNLVIYGESRTLDKLKNGEVVGAISLEPQPITGCSAEYLGQMEYLCVASPEFYQKYF 179
              +N+ +  +  T++ L+ G V+ A++   +P+ GC    LG + Y   ASP+F  ++F
Sbjct: 122 DYLVNIAVDDQDHTVEWLRGGRVLAAVTAHDKPVQGCRVTPLGVLRYHATASPDFMARHF 181

Query: 180 AKGVTPRSLIKAPAVSYDQYDELHNKFLWDYFAVPRD-KVINHTVGSSEAFVRLALSGAA 238
           A GVTP +L +AP ++++Q D L     W   A+  D     H + S++ FV+ +L+G  
Sbjct: 182 ADGVTPAALARAPGLTFNQKDRLQAS--WIRTALGEDVSYPTHWLPSTDGFVKASLAGMG 239

Query: 239 YCLIPRLQIISELESGALINMTPDFMLSYPIFWHHWQLETGVLLEISEAITAYAKSVL 296
           + L P   +   L +G L+ + P   L  P++W   +L    L  ++  +   A+ VL
Sbjct: 240 WGLNPVQLVAEHLAAGRLVELMPGTPLDIPLYWQVNRLAAERLAGLTANMVGTARVVL 297