Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

 Score =  224 bits (571), Expect = 2e-63
 Identities = 119/250 (47%), Positives = 164/250 (65%), Gaps = 1/250 (0%)

Query: 29  LLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVRYTLFIIVL 88
           ++++YG   + A++ L IG  ++  +   V  +L  +  D A+  FI  L    L ++++
Sbjct: 20  MIMEYGSRFLLAVVTLAIGWWLINVLTHRVGRLLALRNADLALQHFITSLANIALKVMLV 79

Query: 89  IAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIGGVA 148
           +   S IGV T S VA IGAA LA+GLALQGSL+NFA GVLI+ FRPF+ GD++E  G +
Sbjct: 80  VNVASMIGVATTSFVAAIGAATLAIGLALQGSLANFAGGVLILLFRPFRIGDWIEAQGTS 139

Query: 149 GSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYKSDLQKTK 208
           G+VDSIQIF TVL++ DNK V++PN ++  G ITN +R  TR+V   +GV Y++DLQK +
Sbjct: 140 GTVDSIQIFHTVLRTGDNKTVIIPNGSLSNGLITNTNRQPTRKVVFDVGVDYEADLQKAR 199

Query: 209 RVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDSMQAIKEALD 268
            VL E L KDPR+L DP     V TL DSSI   +R W KT+DYW V F   +  ++ L 
Sbjct: 200 EVLLE-LAKDPRVLADPAAVAVVSTLGDSSITVSLRCWTKTADYWDVVFMLNELARDRLK 258

Query: 269 ANGIEIPFPQ 278
           A GI+IPFPQ
Sbjct: 259 AAGIDIPFPQ 268