Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score =  205 bits (521), Expect = 2e-57
 Identities = 108/274 (39%), Positives = 162/274 (59%), Gaps = 7/274 (2%)

Query: 17  NQVNTWLTNNSDLLIQYGVNVISAILILFI---GNLVVKGVAGSVANVLKKKEMDKAVVD 73
           N +  WL +N+   +Q+   +   +LIL     G  V + V  S  N  K   +   + D
Sbjct: 288 NSLVNWLASNA---VQHLFQLFIFLLILLAAKGGAKVTRTVVRSAVNS-KNIRISHLMQD 343

Query: 74  FIHGLVRYTLFIIVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAF 133
           F   +    +++I ++  LS+IG+  A V+   G AG+ +G ALQ +LSNFAAG++++ +
Sbjct: 344 FFVSMSGKVVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIY 403

Query: 134 RPFKSGDYVEIGGVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVD 193
           RPF  GD+V  GGV G V  + +  T +++ DN++++VPNS + G  I N +    RRVD
Sbjct: 404 RPFDVGDFVHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVD 463

Query: 194 MVIGVSYKSDLQKTKRVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYW 253
           MV G+ Y  DL K + VL + ++  P +LK P+  I V TL  SSI+F+VRPW KT DYW
Sbjct: 464 MVFGIGYSDDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYW 523

Query: 254 AVYFDSMQAIKEALDANGIEIPFPQMDVHLNKIN 287
            VY+D  + +K   D  GI IPFPQ DVHL+ ++
Sbjct: 524 DVYWDVTKEVKLRFDREGISIPFPQQDVHLHLVD 557