Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1102 a.a., mechanosensitive channel protein, intermediate (smaller, MscS-like) conductance, K+ efflux from Pseudomonas putida KT2440

 Score =  107 bits (267), Expect = 1e-27
 Identities = 69/249 (27%), Positives = 128/249 (51%), Gaps = 11/249 (4%)

Query: 46   IGNLVVKGVAGSVAN---------VLKKKEMDKAVVDFIHGLVRYTLFIIVLIAALSRIG 96
            +G LV+ G+  ++A          VL +  + +        L+ YT+  I +++ LS +G
Sbjct: 830  LGALVIVGITFALAGNLPGLLEVLVLSRLNLAQGSAYATTTLLSYTIVGIGIVSTLSTLG 889

Query: 97   VQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIGGVAGSVDSIQI 156
            V    +  ++ A  + +G  +Q   +NF +G++I+  RP + GD + IG ++G+V  I+I
Sbjct: 890  VSWDKLQWLVAALSVGLGFGMQEIFANFISGIMILFERPVRIGDTITIGNLSGTVSKIRI 949

Query: 157  FQTVLKSPDNKMVVVPNSAVIGGAITNYSRHET-RRVDMVIGVSYKSDLQKTKRVLRETL 215
              T +   D K ++VPN   I G + N+S  +T  RV + +G+ Y SDL   + +L +  
Sbjct: 950  RATTITDFDRKDIIVPNKTFITGQLINWSLTDTVTRVTLKLGIDYGSDLDLVRDLLLKGA 1009

Query: 216  EKDPRILKDPDMTIGVLTLADSSINFVVRPWCK-TSDYWAVYFDSMQAIKEALDANGIEI 274
             ++PR+LKDP+  +  L   +SS++  +R   +   D      +  + I     A+ I+I
Sbjct: 1010 HENPRVLKDPEPIVYFLNFGESSLDHELRMHVRDLGDRNPTLDEINRYINREFKAHNIKI 1069

Query: 275  PFPQMDVHL 283
               Q++V L
Sbjct: 1070 SVRQVEVFL 1078