Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., Small-conductance mechanosensitive channel from Pseudomonas sp. RS175

 Score =  225 bits (573), Expect = 1e-63
 Identities = 123/250 (49%), Positives = 164/250 (65%), Gaps = 1/250 (0%)

Query: 29  LLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVRYTLFIIVL 88
           ++++YG  V+ AI+ L IG  ++  V   +  +L  +  D A+  FI  L    L I++ 
Sbjct: 20  MIMEYGSRVLLAIVTLAIGWWLINKVTQKLGALLALRNADLALQGFISTLANIILKILLA 79

Query: 89  IAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIGGVA 148
           I+  S IGV+T S VA IGAA LA+GLALQGSL+NFA GVLI+ FRPF+ GD++E  GVA
Sbjct: 80  ISVASMIGVETTSFVAAIGAASLAIGLALQGSLANFAGGVLILLFRPFRIGDWIEAQGVA 139

Query: 149 GSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYKSDLQKTK 208
           G+VDSIQIF TVL++ DNK V+VPN  +  G ITN +R  TR+V   +GV Y++DLQK +
Sbjct: 140 GTVDSIQIFHTVLRTGDNKTVIVPNGNLSNGIITNTNRQPTRKVVFDVGVDYQADLQKAR 199

Query: 209 RVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDSMQAIKEALD 268
            VL E L KD R+L DP     + TL DSSI   +R W KT+DYW V F   +  ++ L 
Sbjct: 200 EVLLE-LAKDERVLSDPAPEAVISTLGDSSITVSLRIWVKTADYWNVMFMLNEQARDRLK 258

Query: 269 ANGIEIPFPQ 278
             GI+IPFPQ
Sbjct: 259 DAGIDIPFPQ 268