Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., small-conductance mechanosensitive channel MscS from Serratia liquefaciens MT49

 Score =  306 bits (784), Expect = 3e-88
 Identities = 144/275 (52%), Positives = 198/275 (72%)

Query: 9   EVPIVESFNQVNTWLTNNSDLLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKKKEMD 68
           ++ +V+  N    WL  N DLLIQY VN+++AI+I  IG+++ + V+ +++ V+K + +D
Sbjct: 3   DLNVVDGINGAGNWLVQNQDLLIQYAVNIVAAIVIFIIGSIIARVVSNALSRVMKLRGID 62

Query: 69  KAVVDFIHGLVRYTLFIIVLIAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGV 128
             V DF+  + RY +     IA L R+GVQT SV+AV+GAAGLAVGLALQGSLSNFAAGV
Sbjct: 63  ATVADFLSAMARYGILAFTFIAVLGRVGVQTTSVIAVLGAAGLAVGLALQGSLSNFAAGV 122

Query: 129 LIVAFRPFKSGDYVEIGGVAGSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHE 188
           L+VAFRP ++G+YV++GGVAG+VD +QIF T L++ DNK +VVPN  +I G I NYSR  
Sbjct: 123 LLVAFRPLRAGEYVDLGGVAGTVDQVQIFSTTLRTADNKTIVVPNGKIIAGNIINYSREP 182

Query: 189 TRRVDMVIGVSYKSDLQKTKRVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCK 248
            RRVD+V+GV+Y +D+   K+VL + +  D RI+    +T+ +  +A SS+NFV R W  
Sbjct: 183 NRRVDIVVGVAYNADIDVVKKVLGDVIAADKRIMHAKGVTVRLNEMAPSSLNFVTRSWTT 242

Query: 249 TSDYWAVYFDSMQAIKEALDANGIEIPFPQMDVHL 283
            ++YW VYFD M+  K ALDAN I IPFPQMDVHL
Sbjct: 243 NAEYWNVYFDLMENFKRALDANNIGIPFPQMDVHL 277