Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., Small-conductance mechanosensitive channel from Alteromonas macleodii MIT1002

 Score =  220 bits (561), Expect = 2e-62
 Identities = 115/257 (44%), Positives = 161/257 (62%), Gaps = 2/257 (0%)

Query: 29  LLIQYGVNVISAILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVRYTLFIIVL 88
           L++ Y   ++ AIL L +G  +V      + + L KK  D  +  F+ GL+   L +++L
Sbjct: 21  LVMTYTPKLLLAILTLVVGLWLVNRFVNLLDHRLGKK--DPTLNKFLCGLISAVLKVMLL 78

Query: 89  IAALSRIGVQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEIGGVA 148
           I+  S IG++T S +AV+GAAGLA+GLALQGSL+NFA GVLI+ F+PFK GD +E  G  
Sbjct: 79  ISVASMIGIETTSFIAVVGAAGLAIGLALQGSLANFAGGVLILIFKPFKVGDTIEAEGHL 138

Query: 149 GSVDSIQIFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETRRVDMVIGVSYKSDLQKTK 208
           GSV  IQI  TVL + DNK +V+PN ++    + N S ++ RR DM  G+ Y  D+ K K
Sbjct: 139 GSVSEIQILYTVLNTFDNKRIVIPNGSLSNATLINVSVYDKRRCDMTFGIGYDDDIDKAK 198

Query: 209 RVLRETLEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDSMQAIKEALD 268
           +VL+   E+D R L DP   I V  L D+S++ + RPW  T D W  Y+D  + +K+A D
Sbjct: 199 KVLQRLFEEDERSLTDPAPRICVGGLGDNSVDLMFRPWVATDDLWPYYWDMQEKVKKAFD 258

Query: 269 ANGIEIPFPQMDVHLNK 285
             GI IP+PQ DVHL K
Sbjct: 259 EEGISIPYPQRDVHLYK 275