Pairwise Alignments

Query, 287 a.a., mechanosensitive ion channel protein from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., Small-conductance mechanosensitive channel from Alteromonas macleodii MIT1002

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 76/258 (29%), Positives = 127/258 (49%), Gaps = 11/258 (4%)

Query: 37  VISAILILFIGNLVVKGVAGSVANVLKKKEMDKAVVDFIHGLVRYTLFIIVLIAALSRIG 96
           VI A LI+ +     + V  S++    +  + K       G VR    ++ ++  LS +G
Sbjct: 95  VIEAGLIITLFLFFERFVTYSLSRYRDQSTIVKNTSAIAGGAVRALFAVLAILIILSTMG 154

Query: 97  VQTASVVAVIGAAGLAVGLALQGSLSNFAAGVLIVAFRPFKSGDYVEI-GGVAGSVDSIQ 155
           V    +VA +G   LAV LALQ +L NF +G+ +V  +P + GD++E+  G  G V+ I 
Sbjct: 155 VSVTPIVASLGITSLAVALALQPTLENFFSGIQLVMDKPIRIGDFIELDSGEQGFVEKIG 214

Query: 156 IFQTVLKSPDNKMVVVPNSAVIGGAITNYSRHETR-RVDMVIGVSYKSDLQKTKRVLRET 214
              T ++   N +V++PNS +    + NY   E    V + +GV Y SDL+  + V  E 
Sbjct: 215 WRSTWVRMLPNNIVIMPNSKLSNSKLINYYYPERELSVPVEVGVHYSSDLEHVENVCLEV 274

Query: 215 ----LEKDPRILKDPDMTIGVLTLADSSINFVVRPWCKTSDYWAVYFDS---MQAIKEAL 267
               LE+    ++     +   T  +SSIN  V    +T +Y+  +F     ++ +K+  
Sbjct: 275 ANTILEQHEFGVETYQPFVLFHTFDNSSINLTV--MLRTREYFNRFFIKSAFIKMLKKRF 332

Query: 268 DANGIEIPFPQMDVHLNK 285
           D  GI IPFP   ++L +
Sbjct: 333 DEEGIVIPFPITALNLEQ 350