Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., TonB-dependent receptor from Pseudomonas simiae WCS417

 Score =  117 bits (293), Expect = 2e-30
 Identities = 166/653 (25%), Positives = 259/653 (39%), Gaps = 98/653 (15%)

Query: 35  MVVTAAGYAQVIQNAPASISVISREDLESRYYRDVTDALKSVPGVTV--TGG-GDTTDIS 91
           +V++A    Q   ++ A+ +V +R+D++      VTD L  VPGV V  TGG G    I 
Sbjct: 32  VVISANRQVQARNDSSAANTVFTRDDIDRLQPTSVTDLLSRVPGVQVAPTGGRGSLPGIF 91

Query: 92  IRGMGSNYTLILVDGKRQTSRQTRPNSDGPGIEQGWLPPLQAIERIEVIRGPMSTLYGSD 151
           IRG  S  +L+LVDG+R  +      S   G++      +  IER+EV+RG  S +YGSD
Sbjct: 92  IRGTKSAQSLVLVDGQRIANT----TSGDSGLQY---LNVDQIERVEVLRGSRSVIYGSD 144

Query: 152 AIGGVINIITRKDQQQW------SGNVQLSTVVQENRASGDEQSANFFVTGPLSDALSLQ 205
           AIGG I + TR++ +Q        G     T  +    SG ++   F +   L D   + 
Sbjct: 145 AIGGGIQVFTRRNTEQGLQPRLKLGFGSNQTWERSLGLSGGDEHTRFNLGASLDDTAGIN 204

Query: 206 VYGQTTQRDEDEIEHGYGDKSLRSLTSKLNYQLNPDHQL--QLEAGVSAQDRENNVGKSA 263
               +   D D     Y ++SL          LN  H    +LEAG +  D   N GKS 
Sbjct: 205 STHTSFPSDGD--HDAYRNQSL---------SLNLSHSFSDELEAGFNLLD---NRGKSE 250

Query: 264 QSSG---CRGTCSNTDNQYRRNHVAVSHQGDWQDV-----GQSDTYLQYEENTNKSRE-M 314
             +       T   T  Q    +  VS    + D       QS   L + EN +  R+ +
Sbjct: 251 YDNSFGRYDATTGRTLGQKPYTNYTVSSASGYVDAKLNERWQSRLELGHSENRDTKRDTL 310

Query: 315 SIDNTVFKSTLVAPIGEHMLSFGVEGKHESLEDKTSNKISSRT-HISNTQW--AGFIEDE 371
           S D +VF +   +   ++ L+           D   ++    T    N++W  A F++  
Sbjct: 311 SDDFSVFNTYRDSVNWQNDLTLNDRNSLILGGDWYEDRFHGSTLFTENSRWNRAAFVQHR 370

Query: 372 WALAEQFRLTFGGRLDHDKNYGSHFSPRVYGVWNLDPLWTVKGGVSTGFRAPQLREV-TP 430
           +   + F    G R D ++ +G   S        ++P   V    S GFRAP   ++  P
Sbjct: 371 FK-GDWFSTELGLRRDQNQQFGGQNSWSGTLTLPVNPDNDVLLSYSEGFRAPTFNDLYYP 429

Query: 431 DWGQVSGGGNIYGNPDLKPETSINKELSLMYSTGSGLAASLTAFHNDFKDKI--TRVACP 488
           D          Y NP+L+PETS + EL              + +  D  D I   R   P
Sbjct: 430 D--------TKYSNPNLQPETSKSYELQWRSQLSDSTRLEASLYRTDLSDAIILDRSGKP 481

Query: 489 ANICTAGPNQWGAAPTYRVNIDEAETYGAEATLSLPITESVELSSSYTYTHSEQKSGNFA 548
            N+ +A  N + AA        + E +G +  L L I +  +  S +T     +++ N  
Sbjct: 482 QNVASARINGFEAAL-------KQELFGWQGNLGLSIIDPRDRDSGHTLARRARRTVN-- 532

Query: 549 GRPLLQLPKHL--FNANLSWQTTDRLNSWANLNYRGKEMQPEGGASNDDFIAPSYTFIDT 606
               L L +         SWQ         + +Y  ++     G          Y  +  
Sbjct: 533 ----LDLDRQFDKLGVGASWQA-------ISSSYDDEDNTHRLG---------GYALLGL 572

Query: 607 GVTYALTDTATIKAAVYNLFDQEVNYAEYG-----------YVEDGRRYWLGL 648
             ++AL     +   V NL D+    A Y            Y E+GR + LG+
Sbjct: 573 RSSWALNREVALSLKVDNLLDKTYARARYSYNDPTYANNQDYREEGRVWMLGV 625