Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 702 a.a., TonB-dependent receptor from Pectobacterium carotovorum WPP14

 Score =  369 bits (947), Expect = e-106
 Identities = 260/721 (36%), Positives = 369/721 (51%), Gaps = 98/721 (13%)

Query: 9   VSLSVTLGLMFSASAFAQDATKTDETMVVTAAGYAQVIQNAPASISVISREDLESRYYRD 68
           +S+  ++ L  + +         D+T+VVTA+GY Q I  A ASISV+S+++L  R Y D
Sbjct: 3   ISIRKSVALALATTVSTPVIAAQDDTLVVTASGYEQKITEAAASISVVSQDELTKRKYND 62

Query: 69  VTDALKSVPGVTV---TGGGDTTDISIRGMGSNYTLILVDGKRQT-SRQTRPNSDGPGIE 124
           + +AL  V GV V   TG     DISIRGM S+YTLILVDG RQ  S    PN  G  + 
Sbjct: 63  LGEALSDVEGVDVRSSTGKTGGLDISIRGMPSDYTLILVDGIRQNGSSDVTPNGFGT-MN 121

Query: 125 QGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRKDQQQWSGNVQLSTVVQENRAS 184
            G++PPL AIERIEVIRGPMSTLYGSDA+GGV+NIIT+K  ++W GN+ L    QE+R  
Sbjct: 122 TGFIPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITKKASKEWVGNITLDHTFQEDRDY 181

Query: 185 GDEQSANFFVTGPL-SDALSLQVYGQTTQRDEDEIEHGYG-------------DKSLRSL 230
           GD    + + +G L  D L L + G   +RD  E++   G             D  L  L
Sbjct: 182 GDASKFSIYSSGALIEDKLGLALRGNIFRRDASEVKSSEGALLNQRGANPVKSDNYL--L 239

Query: 231 TSKLNYQLNPDHQLQLEAGVSAQ---DRENNVGKSAQSSGCRGTCSNTDNQYRRNHVAVS 287
             KL + LN  + L L+  V+ Q   ++EN +G    + G  G+       Y+R  + + 
Sbjct: 240 GGKLTWILNDKNSLWLDGEVANQQYDNKENQLGTIGATGGYEGSL-----HYQRRKLTLG 294

Query: 288 HQGDWQDVGQSDTYLQYEENTNKSREMSID------------------NTVFKSTLVAPI 329
                   G  ++ L Y E  NK R ++ D                  N +  S LVAP+
Sbjct: 295 SDNQ-LSFGSWNSSLSYSETDNKGRLITTDSVPSGSPAVGQKRRLENTNVILDSKLVAPV 353

Query: 330 GE-HMLSFGVEGKHESLEDKTSNKISSRTHISNTQWAGFIEDEWALAEQFRLTFGGRLDH 388
           GE H+++ G +  + +L+D      ++        WA F EDEW L +   LT+G R ++
Sbjct: 354 GESHLVTIGGQYWNATLKDGVV-LANNGNKFKQDSWALFSEDEWRLLDSLALTYGARYEY 412

Query: 389 DKNYGSHFSPRVYGVWN-LDPLWTVKGGVSTGFRAPQLREVTPDWGQVSGGG--NIYGNP 445
            + +G H SPR Y VWN LD L T+KGGVSTG++ P L ++      V+  G   + GNP
Sbjct: 413 HETFGGHVSPRAYVVWNALDDL-TIKGGVSTGYKTPSLAQLHNGVSGVTSQGTETVIGNP 471

Query: 446 DLKPETSINKELSLMYSTGSGLAASLTAFHNDFKDKITRVACPANICTAGPNQWGAAPTY 505
           +LKPE S N EL + Y   +G AA+ T F+N F++KI       ++ T       A  +Y
Sbjct: 472 NLKPEESTNTELGVYYENYTGFAANATLFNNHFRNKIDSY----DVSTT-----PAISSY 522

Query: 506 RVNIDEAETYGAEATLSLPI-TESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLFNANL 564
           R NI +A T G E   ++P+ +E   L+ +YT+T SEQK G   G PL   PKH+ NA L
Sbjct: 523 R-NIGKAVTQGVELGSTIPLWSEDWTLNVNYTFTDSEQKGGLNPGAPLTNTPKHMANARL 581

Query: 565 SWQTTDRLNSWANLNYRGKEMQPEGGASN---------DDFIA--PSYTFIDTGVTYALT 613
           +W   D L++W    YR K  +     S          DD  A   S+T ++ G +Y ++
Sbjct: 582 NWNVNDNLSTWLKAEYRDKTARYTQNYSTLSASQKDAYDDKGAYFKSFTVVNWGGSYKVS 641

Query: 614 DTATIKAAVYNLFDQE--------------VNYAEY--------GYVEDGRRYWLGLDIA 651
              T+  AV NL D++                 A+Y        G V  GR YWL +++ 
Sbjct: 642 KDVTLNGAVNNLLDKDFTSGIRTYGSGRGAFTTADYYSFSRVTSGSVLPGRNYWLSVNVN 701

Query: 652 F 652
           F
Sbjct: 702 F 702