Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 679 a.a., TonB-dependent receptor from Serratia liquefaciens MT49

 Score =  379 bits (972), Expect = e-109
 Identities = 243/690 (35%), Positives = 361/690 (52%), Gaps = 65/690 (9%)

Query: 7   SPVSLSVTLGLMFSASAFAQ--------DATKTDETMVVTAAGYAQVIQNAPASISVISR 58
           S ++ ++ L LM +   +AQ        DA + D+ +VVTA+G+ Q  + APASISVI +
Sbjct: 11  SRIATAIALALMCAPQVYAQEGGTEKDKDALQEDQ-VVVTASGFKQNKKYAPASISVIDK 69

Query: 59  EDLESRYYRDVTDALKSVPGVTVTGGGD---TTDISIRGMGSNYTLILVDGKRQTSRQTR 115
           +  E +  RDV +A++ V GV V+ G     T D+ IRGM S+YT  +V+  +Q + ++R
Sbjct: 70  KTFEKQNSRDVAEAVQDVSGVFVSNGAGSEVTGDVMIRGMDSSYTSFMVNSIKQNTGESR 129

Query: 116 PNSDGPGIEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRK--DQQQWSGNVQ 173
           P     G E G+LPPL AI+RIEVIRGPMS+LYGSD+IGGV+N+IT+K    ++W G++ 
Sbjct: 130 PYGQNIGTEAGFLPPLAAIDRIEVIRGPMSSLYGSDSIGGVVNVITKKPFGVREWIGSIA 189

Query: 174 LSTVVQENRASGDEQSANFFVTGPL-SDALSLQVYGQTTQRDEDEIEHGYGDKSLRSLTS 232
            ++ +Q+++  G+ Q AN F+ GPL  D L L +      R EDE  + +   + +SL  
Sbjct: 190 GNSFLQQHQDFGNTQQANLFLMGPLVPDVLGLSLSADYLDRREDEKPNAFSKNNKKSLDM 249

Query: 233 KLNYQLNPDHQLQLEAGVSAQDRENNVGKSAQSSGCRGTCSNTDNQYRRNHVAVSHQGDW 292
            L +  N  +   L             G+  +S   +G  +     + R+ ++++H G +
Sbjct: 250 TLGFAANETNLFDLNLA---------KGEKKRSRSAKGGGTPWGWDFDRDALSLTHSGWY 300

Query: 293 QDVGQSDT-YLQYEENTNKSREMSI-------DNTVFKSTLVAPIGEHMLSFGVEGKHES 344
            D   + T Y QYE+  +  R +S+       +N V  S     +GEH L+ G     E+
Sbjct: 301 ADDSVATTSYFQYEKGESVYRSVSLAPQHIQTENYVLNSQAKLSLGEHNLTVGANYSRET 360

Query: 345 LED------KTSNKISSRTHISNTQWAGFIEDEWALAEQFRLTFGGRLDHDKNYGSHFSP 398
           L D      K +  I   T IS   WA F E +W + + F LT   R+D D  +G+H SP
Sbjct: 361 LNDDFYADSKKAPGIDPVTKISRDGWALFAEGQWNI-DDFSLTTSARMDRDNYFGTHISP 419

Query: 399 RVYGVWNLDPLWTVKGGVSTGFRAPQLREVTPDWGQVSGGGNIY-----GNPDLKPETSI 453
           ++YG W LD  W +KGG+S+G++ P LRE +  +    G    Y     GN +LKPETS+
Sbjct: 420 KLYGNWILDEAWALKGGISSGYKKPSLRENSDQFITPRGSNPPYPYLSVGNSELKPETSV 479

Query: 454 NKELSLMYSTGSGLAASLTAFHNDFKDKITRVACPANICTAGPNQWGAAPTYRV------ 507
           N EL L ++    L+   T F+ DFKDKI  V    NIC A  N       Y        
Sbjct: 480 NTELGLYWNNNRDLSLDATVFYTDFKDKIAEV----NICEASENHPCVVNGYNADSIDKY 535

Query: 508 -NIDEAETYGAEATLSLPITESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLFNANLSW 566
            NI +A  YG E       T+S+ LS++YT+  SEQK+G   G  L   PKH+ N +  W
Sbjct: 536 FNIGKANVYGVELNADWQATDSLNLSANYTFNKSEQKNGINKGYALNDFPKHMANLSAKW 595

Query: 567 QTTDRLNSWANLNYRGKEMQPEGGASNDDFIAPSYTFIDTGVTYALTDTATIKAAVYNLF 626
                L+ W+ +NYR +    E   ++  + A  Y  +D GV Y L     + A VYN+ 
Sbjct: 596 AAASALDVWSKVNYRSRN---EDTGNHTRYSA--YALLDAGVIYRLDKHTQVMAGVYNIL 650

Query: 627 D----QEVNYAEYGYVEDGRRYWLGLDIAF 652
           D    +  N+  Y  +E GR Y LGL + F
Sbjct: 651 DTAPKRTTNWGAYPQLE-GRHYNLGLRVDF 679