Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., Colicin I receptor precursor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  381 bits (978), Expect = e-110
 Identities = 247/664 (37%), Positives = 356/664 (53%), Gaps = 65/664 (9%)

Query: 28  ATKTDETMVVTAAGYAQVIQNAPASISVISREDLESRYYRDVTDALKSVPGVTVTGGGDT 87
           AT   ETMVVTA+   Q +++APASISVI+++DL+ R  +++ D LK VPGV +T  GD 
Sbjct: 13  ATDDGETMVVTASAIEQNLKDAPASISVITQQDLQRRPVQNLKDVLKEVPGVQLTNEGDN 72

Query: 88  TD-ISIRGMGSNYTLILVDGKRQTSRQT--RPNSDGPGIEQGWLPPLQAIERIEVIRGPM 144
              +SIRG+ S+YTLIL+DGKR  SR    R N      +  W+P + AIERIEV+RGPM
Sbjct: 73  RKGVSIRGLDSSYTLILIDGKRVNSRNAVFRHND----FDLNWIP-VDAIERIEVVRGPM 127

Query: 145 STLYGSDAIGGVINIITRKDQQQWSGNVQLSTVVQENRASGDEQSANFFVTGPLSD-ALS 203
           S+LYGSDA+GGV+NIIT+K  Q+W G+V + + +QE+R  GD  +  FF +GPL D  L 
Sbjct: 128 SSLYGSDALGGVVNIITKKIGQKWHGSVTVDSTIQEHRDRGDTYNGQFFTSGPLIDGVLG 187

Query: 204 LQVYGQTTQRDEDEIEHGYGDKS-----LRSLTSK-----LNYQLNPDHQLQLEAGVSAQ 253
           ++ YG   +R++DE +      +     +   TS+       +  N +H +    G   Q
Sbjct: 188 MKAYGSLAKREKDEQQSSATTATGETPRIEGFTSRDGNVEFAWTPNENHDVTAGYGFDRQ 247

Query: 254 DRENNVGKSAQSSGCRGTCSNTDNQYRRNHVAVSHQGDWQDVGQSDTYLQYEENTNK--- 310
           DR+++              S   N+  R + A+SH G W D+G S+     E+  NK   
Sbjct: 248 DRDSD--------------SLDKNRLERQNYALSHNGRW-DLGNSELKFYGEKVENKNPG 292

Query: 311 -SREMSIDNTVFKSTLVAPIG--EHMLSFGVEGKHESLEDKTSNKISSRTHISNTQWAGF 367
            S  ++ ++       V P+      L+FG E +H+ L D  +    S T  S +Q+A F
Sbjct: 293 NSSPITSESNSIDGKYVLPLASVNQFLTFGGEWRHDKLSDAVNLTGGSSTKTSASQYALF 352

Query: 368 IEDEWALAEQFRLTFGGRLDHDKNYGSHFSPRVYGVWNLDPLWTVKGGVSTGFRAPQLRE 427
           +EDEW + E   LT G R+D  + YG H+SPR Y V+N     TVKGG +T F+AP L +
Sbjct: 353 LEDEWRIFEPLALTTGIRMDDHETYGDHWSPRAYLVYNATDTLTVKGGWATAFKAPSLLQ 412

Query: 428 VTPDWGQVS--GGGNIYGNPDLKPETSINKELSLMYSTGSGL----AASLTAFHNDFKDK 481
           ++PDW   S  GG  I G+PDLKPETS + EL L Y    G+     AS+T F ND  ++
Sbjct: 413 LSPDWATNSCRGGCRIVGSPDLKPETSESWELGLYYRGEEGILEGVEASVTTFRNDVDNR 472

Query: 482 ITRVACP--------ANICTAGPNQWG-AAPTYR-VNIDEAETYGAEATLSLPITESVEL 531
           I+    P        +N      N  G   P +R  N+++A   G E  L +P  E+ +L
Sbjct: 473 ISISRTPDVNAAPGYSNFVGFETNSRGQRVPVFRYYNVNKARIQGVETELKVPFNEAWKL 532

Query: 532 SSSYTYTHSEQKSGNFAGRPLLQLPKHLFNANLSWQTTDRLNSWA---NLNYRGKEMQPE 588
           S +YTY      S N   +PL  LP H  N  L W+   +L  W+   + NY G++    
Sbjct: 533 SLNYTYNDGRDVS-NGGNKPLSDLPFHTANGTLDWKPV-QLEDWSFYVSGNYTGRKRADS 590

Query: 589 GGASNDDFIAPSYTFIDTGVTYALTDTATIKAAVYNLFDQEVNYAEYGYVEDGRRYWLGL 648
             A         Y   DTG  +  T    ++A V N+ D+++   +YGY EDGRRY++ +
Sbjct: 591 ATAKTPG----GYVVWDTGAAWQATKNVKLRAGVLNVGDKDLKRDDYGYTEDGRRYFMAV 646

Query: 649 DIAF 652
           D  F
Sbjct: 647 DYRF 650