Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., vitamin B12/cobalamin outer membrane transporter (NCBI) from Escherichia coli BW25113

 Score =  135 bits (341), Expect = 4e-36
 Identities = 165/675 (24%), Positives = 260/675 (38%), Gaps = 121/675 (17%)

Query: 22  SAFAQDATKTDETMVVTAAGYAQVIQNAPASISVISREDLESRYYRDVTDALKSVPGVTV 81
           SA+AQD +   +T+VVTA  + Q      A  +V++R+D++      V D L+ +PGV +
Sbjct: 17  SAWAQDTSP--DTLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQSTSVNDVLRRLPGVDI 74

Query: 82  T---GGGDTTDISIRGMGSNYTLILVDGKRQTSRQTRPNSDGPGIEQGWLPPLQAIERIE 138
           T   G G  + I IRG  +++ L+L+DG R        ++D          P+  ++R+E
Sbjct: 75  TQNGGSGQLSSIFIRGTNASHVLVLIDGVRLNLAGVSGSADLSQF------PIALVQRVE 128

Query: 139 VIRGPMSTLYGSDAIGGVINIITRKDQ------QQWSGNVQLSTVVQENRASGDEQSANF 192
            IRGP S +YGSDAIGGV+NIIT +D+        W  N   +  V   +  GD+     
Sbjct: 129 YIRGPRSAVYGSDAIGGVVNIITTRDEPGTEISAGWGSNSYQNYDVSTQQQLGDKTRVTL 188

Query: 193 FVTGPLSDALSLQVYGQT---TQRDED---------EIEHGYGDKSLRSLTSKLNYQLNP 240
                 +    +  YG T    Q D D          +EH + D +         Y    
Sbjct: 189 LGDYAHTHGYDVVAYGNTGTQAQTDNDGFLSKTLYGALEHNFTD-AWSGFVRGYGYDNRT 247

Query: 241 DHQLQLEAGVSAQDRENNVGKSAQSSGCRGTCSNTDNQYRRNHVAVSHQGDWQDVGQSDT 300
           ++      G    D      +S   +G R       +Q   ++   SH    +D      
Sbjct: 248 NYDAYYSPGSPLLDTRKLYSQS-WDAGLRYNGELIKSQLITSY---SHS---KDYNYDPH 300

Query: 301 YLQYEENTNKSREMSIDNTVFKSTLVAPIGEHMLSFGVEGKHESLEDKTSNKISSRTHIS 360
           Y +Y+ +     EM      + + ++  +G   +  GV+ + +                +
Sbjct: 301 YGRYDSSATLD-EMKQYTVQWANNVI--VGHGSIGAGVDWQKQ----------------T 341

Query: 361 NTQWAGFIEDEW----------ALAEQFRLTFGG--RLDHDKNYGSHFSPRVYGVWNLDP 408
            T   G++ED +           L +    TF G  R D +  +G H + +    W    
Sbjct: 342 TTPGTGYVEDGYDQRNTGIYLTGLQQVGDFTFEGAARSDDNSQFGRHGTWQTSAGWEFIE 401

Query: 409 LWTVKGGVSTGFRAPQLREVTPDWGQVSGGGNIYGNPDLKPETSINKELSLMYSTGSGLA 468
            +       T ++AP L       GQ+ G    YGNP+L PE S   E +    T +G+ 
Sbjct: 402 GYRFIASYGTSYKAPNL-------GQLYG---FYGNPNLDPEKSKQWEGAFEGLT-AGVN 450

Query: 469 ASLTAFHNDFKDKITRVACPANICTAGPNQWGAAPTYRVNIDEAETYGAEATLSL---PI 525
             ++ + ND  D I                +        N  +A   G EAT +    P+
Sbjct: 451 WRISGYRNDVSDLI---------------DYDDHTLKYYNEGKARIKGVEATANFDTGPL 495

Query: 526 TESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLFNANLSWQTTDRLNSWANLNYRGKEM 585
           T +V    SY Y  +          PLL+  K      L WQ  D    W      G   
Sbjct: 496 THTV----SYDYVDARNA---ITDTPLLRRAKQQVKYQLDWQLYD--FDW------GITY 540

Query: 586 QPEGGASNDDFIAPSYTFI--------DTGVTYALTDTATIKAAVYNLFDQEVNYAEYGY 637
           Q  G   + D+ +  Y  +        D  V Y +T   T++  + NLFD++     YGY
Sbjct: 541 QYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYPVTSHLTVRGKIANLFDKDYE-TVYGY 599

Query: 638 VEDGRRYWLGLDIAF 652
              GR Y L     F
Sbjct: 600 QTAGREYTLSGSYTF 614