Pairwise Alignments

Query, 652 a.a., iron-regulated outer membrane virulence protein from Vibrio cholerae E7946 ATCC 55056

Subject, 663 a.a., catecholate siderophore receptor CirA from Escherichia coli ECRC62

 Score =  366 bits (940), Expect = e-105
 Identities = 253/695 (36%), Positives = 362/695 (52%), Gaps = 75/695 (10%)

Query: 1   MSRFNPSPVSLSVTLGLMFSASAFAQDATKTD---ETMVVTAAGYAQVIQNAPASISVIS 57
           M R NP      V +GL  SA + A      D   ETMVVTA+   Q +++APASISVI+
Sbjct: 1   MFRLNPF-----VRVGLCLSAISCAWPVLAVDDDGETMVVTASSVEQNLKDAPASISVIT 55

Query: 58  REDLESRYYRDVTDALKSVPGVTVTGGGDTTD-ISIRGMGSNYTLILVDGKRQTSRQT-- 114
           +EDL+ +  +++ D LK VPGV +T  GD    +SIRG+ S+YTLILVDGKR  SR    
Sbjct: 56  QEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLDSSYTLILVDGKRVNSRNAVF 115

Query: 115 RPNSDGPGIEQGWLPPLQAIERIEVIRGPMSTLYGSDAIGGVINIITRKDQQQWSGNVQL 174
           R N      +  W+P + +IERIEV+RGPMS+LYGSDA+GGV+NIIT+K  Q+WSG V +
Sbjct: 116 RHND----FDLNWIP-VDSIERIEVVRGPMSSLYGSDALGGVVNIITKKIGQKWSGTVTV 170

Query: 175 STVVQENRASGDEQSANFFVTGPLSD-ALSLQVYGQTTQRDEDEIEHGYGDK-------- 225
            T +QE+R  GD  +  FF +GPL D  L ++ YG   +R++D+ ++             
Sbjct: 171 DTTIQEHRDRGDTYNGQFFTSGPLIDGVLGMKAYGSLAKREKDDPQNSTTTDTGETPRIE 230

Query: 226 --SLRSLTSKLNYQLNPDHQLQLEAGVSAQDRENNVGKSAQSSGCRGTCSNTDNQYRRNH 283
             S R    +  +  N +H      G   QDR+++              S   N+  R +
Sbjct: 231 GFSSRDGNVEFAWTPNQNHDFTAGYGFDRQDRDSD--------------SLDKNRLERQN 276

Query: 284 VAVSHQGDWQDVGQSDT--YLQYEENTNKSREMSI---DNTV-FKSTLVAPIGEHMLSFG 337
            +VSH G W D G S+   Y +  EN N      I    N V  K TL        L+ G
Sbjct: 277 YSVSHNGRW-DYGTSELKYYGEKVENKNPGNSSPITSESNAVDGKYTLPLTAINQFLTVG 335

Query: 338 VEGKHESLEDKTSNKISSRTHISNTQWAGFIEDEWALAEQFRLTFGGRLDHDKNYGSHFS 397
            E +H+ L D  +    + +  S +Q+A F+EDEW + E   LT G R+D  + YG H+S
Sbjct: 336 GEWRHDKLSDAVNLTGGTSSKTSASQYALFVEDEWRIFEPLALTTGVRMDDHETYGEHWS 395

Query: 398 PRVYGVWNLDPLWTVKGGVSTGFRAPQLREVTPDWGQVS--GGGNIYGNPDLKPETSINK 455
           PR Y V+N     TVKGG +T F+AP L +++PDW   S  G   I G+PDLKPETS + 
Sbjct: 396 PRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWTSNSCRGACKIVGSPDLKPETSESW 455

Query: 456 ELSLMYSTG----SGLAASLTAFHNDFKDKITRVACPANICTA-----------GPNQWG 500
           EL L Y        G+ +S+T F ND KD+I+ ++  +++  A           G N   
Sbjct: 456 ELGLYYMGEEGWLEGVESSVTVFRNDVKDRIS-ISRTSDVNAAPGYQNFVGFETGANGRR 514

Query: 501 AAPTYRVNIDEAETYGAEATLSLPITESVELSSSYTYTHSEQKSGNFAGRPLLQLPKHLF 560
                  N+++A   G E  L +P  +  +LS +YTY      S N   +PL  LP H  
Sbjct: 515 IPVFSYYNVNKARIQGVETELKIPFNDEWKLSINYTYNDGRDVS-NGENKPLSDLPFHTA 573

Query: 561 NANLSWQTTDRLNSWA---NLNYRGKEMQPEGGASNDDFIAPSYTFIDTGVTYALTDTAT 617
           N  L W+    L  W+   + +Y G++      A         YT  +TG  + +T    
Sbjct: 574 NGTLDWKPL-ALEDWSFYVSGHYTGQKRADSATAKTPG----GYTIWNTGAAWQVTKDVK 628

Query: 618 IKAAVYNLFDQEVNYAEYGYVEDGRRYWLGLDIAF 652
           ++A V NL D++++  +Y Y EDGRRY++ +D  F
Sbjct: 629 LRAGVLNLGDKDLSRDDYSYNEDGRRYFMAVDYRF 663